G1797582


Basic Information

Item Value
gene id G1797582
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29744192 ~ 29744854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057150
gtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatccgaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactgtccataggacaacaatcagttgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttattaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaactttttgcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaaga

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057150 True 663 TUCP 0.45 1 29744192 29744854

Neighbor

gene id symbol gene type direction distance location
LOC118943646 NA coding upstream 122118 29621005 ~ 29622074 (+)
LOC110501709 LOC106582175 coding upstream 155109 29500150 ~ 29589083 (+)
tsc22d1 LOC107713726 coding upstream 316786 29340787 ~ 29427406 (+)
LOC110501706 LOC106582180 coding upstream 451617 29290937 ~ 29292575 (+)
LOC110501705 NA coding upstream 479774 29260930 ~ 29264418 (+)
LOC110501715 LOC106582169 coding downstream 113901 29858755 ~ 29872101 (+)
LOC118943587 NA coding downstream 149272 29894126 ~ 29903673 (+)
LOC110501716 LOC106582159 coding downstream 167427 29912281 ~ 29915808 (+)
LOC118943632 LOC100194703 coding downstream 172919 29917773 ~ 29933035 (+)
LOC110501719 LOC106582226 coding downstream 259827 30004681 ~ 30082509 (+)
G1797632 NA non-coding upstream 287 29743321 ~ 29743905 (+)
G1797631 NA non-coding upstream 1419 29742481 ~ 29742773 (+)
G1797626 NA non-coding upstream 8181 29735696 ~ 29736011 (+)
G1797590 NA non-coding upstream 58206 29685731 ~ 29685986 (+)
G1797579 NA non-coding upstream 64012 29679877 ~ 29680180 (+)
G1797580 NA non-coding downstream 569 29745423 ~ 29746868 (+)
G1797678 NA non-coding downstream 88211 29833065 ~ 29833383 (+)
G1797680 NA non-coding downstream 90645 29835499 ~ 29836412 (+)
G1797681 NA non-coding downstream 92260 29837114 ~ 29837376 (+)
G1797687 NA non-coding downstream 99223 29844077 ~ 29844704 (+)
LOC110501700 LOC106582186 other upstream 733919 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 759966 28977890 ~ 28984226 (+)
G1795550 NA other upstream 1652076 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1706114 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1831317 27898367 ~ 27912875 (+)
G1798168 NA other downstream 755802 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1143807 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1501627 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1548698 31293552 ~ 31297419 (+)

Expression


Co-expression Network