Gene
RNA
| Item | Value |
|---|---|
| gene id | G1797693 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 29851540 ~ 29851903 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2057275 | True | 364 | lncRNA | 0.47 | 1 | 29851540 | 29851903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943646 | NA | coding | upstream | 229466 | 29621005 ~ 29622074 (+) |
| LOC110501709 | LOC106582175 | coding | upstream | 262457 | 29500150 ~ 29589083 (+) |
| tsc22d1 | LOC107713726 | coding | upstream | 424134 | 29340787 ~ 29427406 (+) |
| LOC110501706 | LOC106582180 | coding | upstream | 558965 | 29290937 ~ 29292575 (+) |
| LOC110501705 | NA | coding | upstream | 587122 | 29260930 ~ 29264418 (+) |
| LOC110501715 | LOC106582169 | coding | downstream | 6852 | 29858755 ~ 29872101 (+) |
| LOC118943587 | NA | coding | downstream | 42223 | 29894126 ~ 29903673 (+) |
| LOC110501716 | LOC106582159 | coding | downstream | 60378 | 29912281 ~ 29915808 (+) |
| LOC118943632 | LOC100194703 | coding | downstream | 65870 | 29917773 ~ 29933035 (+) |
| LOC110501719 | LOC106582226 | coding | downstream | 152778 | 30004681 ~ 30082509 (+) |
| G1797687 | NA | non-coding | upstream | 6836 | 29844077 ~ 29844704 (+) |
| G1797681 | NA | non-coding | upstream | 14164 | 29837114 ~ 29837376 (+) |
| G1797680 | NA | non-coding | upstream | 15128 | 29835499 ~ 29836412 (+) |
| G1797678 | NA | non-coding | upstream | 18157 | 29833065 ~ 29833383 (+) |
| G1797580 | NA | non-coding | upstream | 104672 | 29745423 ~ 29746868 (+) |
| G1797733 | NA | non-coding | downstream | 58906 | 29910809 ~ 29911312 (+) |
| G1797957 | NA | non-coding | downstream | 148008 | 29999911 ~ 30000210 (+) |
| G1797984 | NA | non-coding | downstream | 181108 | 30033011 ~ 30034968 (+) |
| G1798036 | NA | non-coding | downstream | 270587 | 30122490 ~ 30122745 (+) |
| G1798038 | NA | non-coding | downstream | 274225 | 30126128 ~ 30126849 (+) |
| G1797582 | NA | other | upstream | 106686 | 29744192 ~ 29744854 (+) |
| LOC110501700 | LOC106582186 | other | upstream | 841267 | 28997763 ~ 29010281 (+) |
| LOC110502085 | LOC106582160 | other | upstream | 867314 | 28977890 ~ 28984226 (+) |
| G1795550 | NA | other | upstream | 1759424 | 28091565 ~ 28092116 (+) |
| LOC110501693 | LOC106582057 | other | upstream | 1813462 | 28036917 ~ 28052019 (+) |
| G1798168 | NA | other | downstream | 648753 | 30500656 ~ 30545954 (+) |
| G1798397 | NA | other | downstream | 1036758 | 30888661 ~ 30891067 (+) |
| G1798579 | NA | other | downstream | 1394578 | 31246481 ~ 31292205 (+) |
| G1798597 | NA | other | downstream | 1441649 | 31293552 ~ 31297419 (+) |
