G1798038


Basic Information

Item Value
gene id G1798038
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30126128 ~ 30126849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057659
agcacggtggctaggaaaaactccctagaaaggcaaaaacctaggaagagaggaaccaggttatgaggggtggccagtcctcttctggctgtgccgggtggagatcacagtggttgtagagggtgcaacaggataagcacctcaagagtaaaaatgaacagtttagggttccatagccgcaggtagaacagttgaaactggaacagcggcaaggccaggtggactagggacagcaaggagtcatcatgccaggtagtcctgacgcatggtcctagggctcaggtcctccgagagagagaaagagagaattagagagagcatacttaaattcacacaggacaccggataagactcccattcagagtcagtgtcactgtgaaagaaaatgttcagttagaatagtttcacatatgagccctgtatcaacaggtataataaacagatatatatagagagttgaaggttgaatatattaggttgaatatattattatattattattacttgctagatctactgtctctttcatattatgacatttcagctagatccactgtctcttatattatgacagaccagctagatctaccgtctttattatattacaacagaccagctgtatctactgtctccatttcactttggccattgatgttgtcctgccctctcctcaacagcctcaaataggctatttcatgtgggttggggtggggcggcagaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057659 True 722 lncRNA 0.44 1 30126128 30126849

Neighbor

gene id symbol gene type direction distance location
LOC110502086 NA coding upstream 607 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 7788 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 43619 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 193093 29917773 ~ 29933035 (+)
LOC110501716 LOC106582159 coding upstream 210320 29912281 ~ 29915808 (+)
LOC110501723 LOC106582229 coding downstream 51870 30178719 ~ 30203292 (+)
arsh LOC106582230 coding downstream 86815 30213664 ~ 30217941 (+)
LOC110501728 LOC106582235 coding downstream 308474 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 343563 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 379435 30506284 ~ 30519043 (+)
G1798036 NA non-coding upstream 3383 30122490 ~ 30122745 (+)
G1797984 NA non-coding upstream 91160 30033011 ~ 30034968 (+)
G1797957 NA non-coding upstream 125918 29999911 ~ 30000210 (+)
G1797733 NA non-coding upstream 214816 29910809 ~ 29911312 (+)
G1797693 NA non-coding upstream 274225 29851540 ~ 29851903 (+)
G1798048 NA non-coding downstream 10823 30137672 ~ 30137948 (+)
G1798050 NA non-coding downstream 13917 30140766 ~ 30141329 (+)
G1798003 NA non-coding downstream 21032 30147881 ~ 30150071 (+)
G1798055 NA non-coding downstream 32221 30159070 ~ 30159323 (+)
G1798062 NA non-coding downstream 43586 30170435 ~ 30170712 (+)
G1797582 NA other upstream 381274 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1115855 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1141902 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2034012 28091565 ~ 28092116 (+)
G1798168 NA other downstream 373807 30500656 ~ 30545954 (+)
G1798397 NA other downstream 761812 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1119632 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1166703 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2240787 32317123 ~ 32374208 (+)

Expression


Co-expression Network