G1798048


Basic Information

Item Value
gene id G1798048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30137672 ~ 30137948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057670
gaaccactcctttattgggggtgtcttgctaattgcctataatttccacctgttgtctattccatttgcacaacagcatgtgaaatgtattgtcaatcattgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgttccctttatttttttgagcagtgtatataaagcTTGTGTTTCGATAATATAAATGTCTAATAGATTCAGTATTCGTCTCTCCTGTCACCATCAGCTCTGAGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057670 True 277 lncRNA 0.37 1 30137672 30137948

Neighbor

gene id symbol gene type direction distance location
LOC110502086 NA coding upstream 12151 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 19332 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 55163 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 204637 29917773 ~ 29933035 (+)
LOC110501716 LOC106582159 coding upstream 221864 29912281 ~ 29915808 (+)
LOC110501723 LOC106582229 coding downstream 40771 30178719 ~ 30203292 (+)
arsh LOC106582230 coding downstream 75716 30213664 ~ 30217941 (+)
LOC110501728 LOC106582235 coding downstream 297375 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 332464 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 368336 30506284 ~ 30519043 (+)
G1798038 NA non-coding upstream 10823 30126128 ~ 30126849 (+)
G1798036 NA non-coding upstream 14927 30122490 ~ 30122745 (+)
G1797984 NA non-coding upstream 102704 30033011 ~ 30034968 (+)
G1797957 NA non-coding upstream 137462 29999911 ~ 30000210 (+)
G1797733 NA non-coding upstream 226360 29910809 ~ 29911312 (+)
G1798050 NA non-coding downstream 2818 30140766 ~ 30141329 (+)
G1798003 NA non-coding downstream 9933 30147881 ~ 30150071 (+)
G1798055 NA non-coding downstream 21122 30159070 ~ 30159323 (+)
G1798062 NA non-coding downstream 32487 30170435 ~ 30170712 (+)
G1798064 NA non-coding downstream 34118 30172066 ~ 30172292 (+)
G1797582 NA other upstream 392818 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1127399 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1153446 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2045556 28091565 ~ 28092116 (+)
G1798168 NA other downstream 362708 30500656 ~ 30545954 (+)
G1798397 NA other downstream 750713 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1108533 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1155604 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2229688 32317123 ~ 32374208 (+)

Expression


Co-expression Network