G1798069


Basic Information

Item Value
gene id G1798069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30177647 ~ 30177987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057691
cagcatATAgcaaggaggtcagagacctggccgtgtggtgccaggacaacaacctctcccacaatgtgatcaagactaaggagatgattgtggactacaggaaaaggaggaccgagcacgctcccattctcatcgacgggtctgtagtggagcaggttgagagcttctagttccttggtgtccacatcacgagcaaactaacatggtccaagcacaccaagacagttgtgaagagggcacaacaaaacctattccccctcaggagactgaaaagatttggcatgggtcctcagatcctcaaaaggttctacagctgcaccattgagagcactggttgcatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057691 True 341 lncRNA 0.51 1 30177647 30177987

Neighbor

gene id symbol gene type direction distance location
LOC110502086 NA coding upstream 52126 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 59307 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 95138 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 244612 29917773 ~ 29933035 (+)
LOC110501716 LOC106582159 coding upstream 261839 29912281 ~ 29915808 (+)
LOC110501723 LOC106582229 coding downstream 732 30178719 ~ 30203292 (+)
arsh LOC106582230 coding downstream 35677 30213664 ~ 30217941 (+)
LOC110501728 LOC106582235 coding downstream 257336 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 292425 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 328297 30506284 ~ 30519043 (+)
G1798068 NA non-coding upstream 1958 30175207 ~ 30175689 (+)
G1798064 NA non-coding upstream 5355 30172066 ~ 30172292 (+)
G1798062 NA non-coding upstream 6935 30170435 ~ 30170712 (+)
G1798055 NA non-coding upstream 18324 30159070 ~ 30159323 (+)
G1798003 NA non-coding upstream 27576 30147881 ~ 30150071 (+)
G1798089 LOC100380853 non-coding downstream 32132 30210119 ~ 30210340 (+)
G1798095 NA non-coding downstream 71333 30249320 ~ 30249550 (+)
G1798139 NA non-coding downstream 170699 30348686 ~ 30348922 (+)
G1798148 mab21l3 non-coding downstream 221191 30399178 ~ 30400374 (+)
G1798149 mab21l3 non-coding downstream 223686 30401673 ~ 30402698 (+)
G1797582 NA other upstream 432793 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1167374 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1193421 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2085531 28091565 ~ 28092116 (+)
G1798168 NA other downstream 322669 30500656 ~ 30545954 (+)
G1798397 NA other downstream 710674 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1068494 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1115565 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2189649 32317123 ~ 32374208 (+)

Expression


Co-expression Network