G1798095


Basic Information

Item Value
gene id G1798095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30249320 ~ 30249550 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057717
tctcctgactgtactgtctcctctcttgactgcgctctctcctctcctgactttactgtctcctctcctgactgtgctgtctcctctcctgactgtactgtctcctctcctgactgcactctctcctctcctgactgtactgtctcctctcgtctcctgactgtgctgtctcctctcctgactgcactctctcctctcctgactgtactgtctcctctcctgactgtactc

Function

NR:

description
uncharacterized protein At5g39570-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057717 True 231 lncRNA 0.54 1 30249320 30249550

Neighbor

gene id symbol gene type direction distance location
arsh LOC106582230 coding upstream 31379 30213664 ~ 30217941 (+)
LOC110501723 LOC106582229 coding upstream 46028 30178719 ~ 30203292 (+)
LOC110502086 NA coding upstream 123799 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 130980 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 166811 30004681 ~ 30082509 (+)
LOC110501728 LOC106582235 coding downstream 185773 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 220862 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 256734 30506284 ~ 30519043 (+)
LOC110501731 LOC106582241 coding downstream 302811 30552361 ~ 30575546 (+)
trnal-caa-106 NA coding downstream 329946 30579496 ~ 30579604 (+)
G1798089 LOC100380853 non-coding upstream 38980 30210119 ~ 30210340 (+)
G1798069 NA non-coding upstream 71333 30177647 ~ 30177987 (+)
G1798068 NA non-coding upstream 73631 30175207 ~ 30175689 (+)
G1798064 NA non-coding upstream 77028 30172066 ~ 30172292 (+)
G1798062 NA non-coding upstream 78608 30170435 ~ 30170712 (+)
G1798139 NA non-coding downstream 99136 30348686 ~ 30348922 (+)
G1798148 mab21l3 non-coding downstream 149628 30399178 ~ 30400374 (+)
G1798149 mab21l3 non-coding downstream 152123 30401673 ~ 30402698 (+)
G1798191 LOC106581772 non-coding downstream 174529 30424079 ~ 30424311 (+)
G1798194 NA non-coding downstream 178986 30428536 ~ 30432515 (+)
LOC118943632 LOC100194703 other upstream 323938 29917773 ~ 29933035 (+)
G1797582 NA other upstream 504466 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1239047 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1265094 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2157204 28091565 ~ 28092116 (+)
G1798168 NA other downstream 251106 30500656 ~ 30545954 (+)
G1798397 NA other downstream 639111 30888661 ~ 30891067 (+)
G1798579 NA other downstream 996931 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1044002 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2118086 32317123 ~ 32374208 (+)

Expression


Co-expression Network