G1798194


Basic Information

Item Value
gene id G1798194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30428536 ~ 30432515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057829
AAAGACAGTGGAGAAGGGGACCGCACGTTGGATCAGGACTAACACGCTGCTTTTTGTGAAATGGAAGGACACTAGGGAAGTAACCAAGCTCCCCACACAGCATAAGGCATTCAATAACGGGGCATGGGTGAGGAAGAATGCCCCTGTTTCTGTGAATGACTACAATTCCAGCATGGAGGGTGTCAACCTATCTGTTGCTCTGATAGGCTACCACCAGGTCCTCCACTAGACCAGGATGTGGTAGAAGACCTTTTTTGTACCACTTTGTGGACATTTCTACAGTAAATGCTTTCATTCTGCACAAGCAGATAGCCAAAGCAAAAAAGTCAAACCCCtctcGCCTTCCGAGAGCAGCTGGTGTTGGAAATGGCTGAATTGGGGGCCCAAAGCAACCTCACAACCATCACAAGACCCCCCACTCAAGGTGAGTGCCACTATCCAACACACATGACAAAAGAAAGAACTGTAAGCATTGCACAAAACACAGGGGCCAAAAAATGGTGAAATGCCAGATCTTCTGTCCGAAATGCCAGATCGCTTTTTGTTTCCTGGCAGAGAGACTGCTTCAAAGACTTATCATGACACGTACAAGCTATGGTGAAAGTGAAATCTAATCATCTACA

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057829 True 623 lncRNA 0.47 2 30428536 30432515

Neighbor

gene id symbol gene type direction distance location
arsh LOC106582230 coding upstream 210595 30213664 ~ 30217941 (+)
LOC110501723 LOC106582229 coding upstream 225244 30178719 ~ 30203292 (+)
LOC110502086 NA coding upstream 303015 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 310196 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 346027 30004681 ~ 30082509 (+)
LOC110501728 LOC106582235 coding downstream 2808 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 37897 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 73769 30506284 ~ 30519043 (+)
LOC110501731 LOC106582241 coding downstream 119846 30552361 ~ 30575546 (+)
trnal-caa-106 NA coding downstream 146981 30579496 ~ 30579604 (+)
G1798191 LOC106581772 non-coding upstream 4225 30424079 ~ 30424311 (+)
G1798149 mab21l3 non-coding upstream 25838 30401673 ~ 30402698 (+)
G1798148 mab21l3 non-coding upstream 28162 30399178 ~ 30400374 (+)
G1798139 NA non-coding upstream 79614 30348686 ~ 30348922 (+)
G1798095 NA non-coding upstream 178986 30249320 ~ 30249550 (+)
G1798195 NA non-coding downstream 93 30432608 ~ 30432833 (+)
G1798403 sucla2 non-coding downstream 468470 30900985 ~ 30901385 (+)
G1798446 NA non-coding downstream 539096 30971611 ~ 30971848 (+)
G1798447 NA non-coding downstream 543517 30976032 ~ 30976479 (+)
G1798473 NA non-coding downstream 599226 31031741 ~ 31031995 (+)
LOC118943632 LOC100194703 other upstream 503154 29917773 ~ 29933035 (+)
G1797582 NA other upstream 683682 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1418263 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1444310 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2336420 28091565 ~ 28092116 (+)
G1798168 NA other downstream 68141 30500656 ~ 30545954 (+)
G1798397 NA other downstream 456146 30888661 ~ 30891067 (+)
G1798579 NA other downstream 813966 31246481 ~ 31292205 (+)
G1798597 NA other downstream 861037 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 1935121 32317123 ~ 32374208 (+)

Expression


Co-expression Network