Gene
RNA
| Item | Value |
|---|---|
| gene id | G1799630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31583022 ~ 31583964 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2059402 | False | 304 | lncRNA | 0.53 | 2 | 31583022 | 31583533 |
| TU2059403 | True | 369 | lncRNA | 0.54 | 2 | 31583228 | 31583964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pde1a | LOC106582264 | coding | upstream | 47501 | 31458011 ~ 31535521 (+) |
| LOC110501756 | LOC106586411 | coding | upstream | 216211 | 31364542 ~ 31366811 (+) |
| dnajc10 | LOC106582260 | coding | upstream | 315893 | 31249607 ~ 31267129 (+) |
| LOC110502091 | LOC106582258 | coding | upstream | 345659 | 31206388 ~ 31237363 (+) |
| LOC110501750 | LOC106582256 | coding | upstream | 395624 | 31089015 ~ 31187398 (+) |
| neurod1 | LOC106582267 | coding | downstream | 51546 | 31635510 ~ 31638598 (+) |
| cerkl | cerkl | coding | downstream | 60456 | 31644420 ~ 31738039 (+) |
| cwc22 | LOC106582271 | coding | downstream | 510210 | 32094174 ~ 32144432 (+) |
| znf385b | znf385b | coding | downstream | 571331 | 32155295 ~ 32312355 (+) |
| LOC110501767 | LOC106582273 | coding | downstream | 733159 | 32317123 ~ 32374208 (+) |
| G1799624 | NA | non-coding | upstream | 10568 | 31572249 ~ 31572454 (+) |
| G1799506 | NA | non-coding | upstream | 30547 | 31503418 ~ 31552475 (+) |
| G1798661 | NA | non-coding | upstream | 167055 | 31378219 ~ 31415967 (+) |
| G1798615 | NA | non-coding | upstream | 267994 | 31313092 ~ 31315028 (+) |
| G1798604 | LOC107601366 | non-coding | upstream | 283789 | 31298367 ~ 31299233 (+) |
| G1799693 | NA | non-coding | downstream | 58779 | 31642743 ~ 31643059 (+) |
| G1799723 | NA | non-coding | downstream | 116389 | 31700353 ~ 31700765 (+) |
| G1799699 | itga4 | non-coding | downstream | 161141 | 31745105 ~ 31746376 (+) |
| G1799858 | NA | non-coding | downstream | 350615 | 31934579 ~ 31936678 (+) |
| G1798597 | NA | other | upstream | 285603 | 31293552 ~ 31297419 (+) |
| G1798579 | NA | other | upstream | 290817 | 31246481 ~ 31292205 (+) |
| G1798397 | NA | other | upstream | 691955 | 30888661 ~ 30891067 (+) |
| G1798168 | NA | other | upstream | 1037068 | 30500656 ~ 30545954 (+) |
| LOC118943632 | LOC100194703 | other | upstream | 1657640 | 29917773 ~ 29933035 (+) |
| G1800754 | NA | other | downstream | 1326829 | 32910793 ~ 32914182 (+) |
| LOC110501795 | LOC106596205 | other | downstream | 4156475 | 35740427 ~ 35760519 (+) |
| G1804873 | NA | other | downstream | 4290598 | 35874562 ~ 35875452 (+) |
| G1805191 | NA | other | downstream | 4779632 | 36363596 ~ 36363930 (+) |
