Gene
RNA
| Item | Value |
|---|---|
| gene id | G1800628 |
| gene name | LOC106582274 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 32385497 ~ 32388442 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2060465 | True | 632 | lncRNA | 0.49 | 2 | 32385497 | 32388442 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943602 | NA | coding | downstream | 206492 | 32178641 ~ 32179005 (-) |
| ube2e3 | ub2e3 | coding | downstream | 387146 | 31944574 ~ 31998351 (-) |
| itga4 | itga4 | coding | downstream | 611485 | 31736087 ~ 31774012 (-) |
| itprid2 | ssfa2 | coding | downstream | 766892 | 31572817 ~ 31618605 (-) |
| LOC110501758 | ppr1c | coding | downstream | 817990 | 31544328 ~ 31567507 (-) |
| LOC110501778 | LOC106586454 | coding | upstream | 467517 | 32855959 ~ 32882104 (-) |
| LOC110501785 | LOC100194642 | coding | upstream | 782800 | 33171242 ~ 33180375 (-) |
| LOC110502092 | erbb4 | coding | upstream | 1013306 | 33401748 ~ 33509768 (-) |
| LOC118936582 | erbb4 | coding | upstream | 1109222 | 33497664 ~ 33632178 (-) |
| LOC110501786 | LOC106586446 | coding | upstream | 1298740 | 33687182 ~ 33927932 (-) |
| G1800598 | sestd1 | non-coding | downstream | 31418 | 32341848 ~ 32354079 (-) |
| G1800533 | NA | non-coding | downstream | 73323 | 32235852 ~ 32312174 (-) |
| G1800556 | NA | non-coding | downstream | 111488 | 32273741 ~ 32274009 (-) |
| G1800466 | NA | non-coding | downstream | 223143 | 32135651 ~ 32162354 (-) |
| G1801061 | LOC106582275 | non-coding | upstream | 153075 | 32541517 ~ 32542662 (-) |
| G1801144 | NA | non-coding | upstream | 250801 | 32639243 ~ 32640022 (-) |
| G1801198 | NA | non-coding | upstream | 319138 | 32707580 ~ 32708106 (-) |
| G1801217 | NA | non-coding | upstream | 331820 | 32720262 ~ 32721442 (-) |
| G1801069 | NA | non-coding | upstream | 410163 | 32798605 ~ 32799642 (-) |
| LOC110501748 | LOC106582253 | other | downstream | 1343281 | 31037006 ~ 31042302 (-) |
| G1799132 | LOC106582249 | other | downstream | 1390195 | 30976894 ~ 30995302 (-) |
| LOC110502090 | LOC106586488 | other | downstream | 1421963 | 30960714 ~ 30963603 (-) |
| G1798869 | NA | other | downstream | 1865825 | 30486989 ~ 30519672 (-) |
| G1798781 | NA | other | downstream | 2224811 | 30160234 ~ 30160686 (-) |
| G1801195 | NA | other | upstream | 315358 | 32703800 ~ 32704323 (-) |
| G1801071 | NA | other | upstream | 371416 | 32759858 ~ 32777777 (-) |
| G1801352 | NA | other | upstream | 562025 | 32950467 ~ 32953670 (-) |
| G1801331 | NA | other | upstream | 569880 | 32958322 ~ 32960485 (-) |
| bard1 | bard1 | other | upstream | 2130064 | 34473620 ~ 34544232 (-) |
