Gene
RNA
| Item | Value |
|---|---|
| gene id | G1801334 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 32956998 ~ 32957504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2061256 | False | 293 | lncRNA | 0.40 | 1 | 32956998 | 32957290 |
| TU2061257 | True | 507 | lncRNA | 0.36 | 1 | 32956998 | 32957504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501778 | LOC106586454 | coding | downstream | 74894 | 32855959 ~ 32882104 (-) |
| LOC118943602 | NA | coding | downstream | 777993 | 32178641 ~ 32179005 (-) |
| ube2e3 | ub2e3 | coding | downstream | 958647 | 31944574 ~ 31998351 (-) |
| itga4 | itga4 | coding | downstream | 1182986 | 31736087 ~ 31774012 (-) |
| itprid2 | ssfa2 | coding | downstream | 1338393 | 31572817 ~ 31618605 (-) |
| LOC110501785 | LOC100194642 | coding | upstream | 213738 | 33171242 ~ 33180375 (-) |
| LOC110502092 | erbb4 | coding | upstream | 444244 | 33401748 ~ 33509768 (-) |
| LOC118936582 | erbb4 | coding | upstream | 540160 | 33497664 ~ 33632178 (-) |
| LOC110501786 | LOC106586446 | coding | upstream | 729678 | 33687182 ~ 33927932 (-) |
| LOC110502093 | LOC106582292 | coding | upstream | 993549 | 33951053 ~ 33983502 (-) |
| G1801333 | NA | non-coding | downstream | 576 | 32953796 ~ 32956422 (-) |
| G1801327 | NA | non-coding | downstream | 33736 | 32919863 ~ 32923262 (-) |
| G1801322 | NA | non-coding | downstream | 43105 | 32913333 ~ 32913893 (-) |
| G1801066 | NA | non-coding | downstream | 147475 | 32806574 ~ 32809523 (-) |
| G1801067 | NA | non-coding | downstream | 150884 | 32800789 ~ 32806114 (-) |
| G1801331 | NA | non-coding | upstream | 818 | 32958322 ~ 32960485 (-) |
| G1801479 | LOC106582286 | non-coding | upstream | 185162 | 33142666 ~ 33143768 (-) |
| G1801548 | NA | non-coding | upstream | 287066 | 33244570 ~ 33244783 (-) |
| G1801582 | NA | non-coding | upstream | 308653 | 33266157 ~ 33266381 (-) |
| G1801586 | NA | non-coding | upstream | 310442 | 33267946 ~ 33268155 (-) |
| G1801352 | NA | other | downstream | 3328 | 32950467 ~ 32953670 (-) |
| G1801071 | NA | other | downstream | 179221 | 32759858 ~ 32777777 (-) |
| G1801195 | NA | other | downstream | 252675 | 32703800 ~ 32704323 (-) |
| LOC110501748 | LOC106582253 | other | downstream | 1914782 | 31037006 ~ 31042302 (-) |
| G1799132 | LOC106582249 | other | downstream | 1961696 | 30976894 ~ 30995302 (-) |
| bard1 | bard1 | other | upstream | 1561002 | 34473620 ~ 34544232 (-) |
| G1803964 | NA | other | upstream | 2168975 | 35126479 ~ 35126833 (-) |
| LOC110502094 | LOC106582301 | other | upstream | 2249959 | 35138330 ~ 35471205 (-) |
| G1805927 | LOC106582360 | other | upstream | 3100340 | 36057844 ~ 36059768 (-) |
