G1801846


Basic Information

Item Value
gene id G1801846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 33715692 ~ 33739489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2061803
tcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcgtcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2061803 True 323 lncRNA 0.44 2 33715692 33739489

Neighbor

gene id symbol gene type direction distance location
LOC118943604 NA coding upstream 516376 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 544548 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 718183 32997434 ~ 32997509 (+)
LOC110501783 kansl1l coding upstream 722682 32964607 ~ 32993010 (+)
LOC110501782 LOC106582283 coding upstream 755192 32939577 ~ 32960500 (+)
trnaa-ugc-176 NA coding downstream 55536 33795025 ~ 33795098 (+)
LOC110501788 vwc2l coding downstream 724244 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 863390 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 1042016 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 1308243 35047732 ~ 35049458 (+)
G1801647 NA non-coding upstream 396501 33318951 ~ 33319191 (+)
G1801600 NA non-coding upstream 432670 33282661 ~ 33283022 (+)
G1801578 NA non-coding upstream 451085 33264401 ~ 33264607 (+)
G1801562 NA non-coding upstream 461927 33253558 ~ 33253765 (+)
G1801558 NA non-coding upstream 465625 33249856 ~ 33250067 (+)
G1801974 NA non-coding downstream 99341 33838830 ~ 33839181 (+)
G1802061 NA non-coding downstream 241452 33980941 ~ 33981271 (+)
G1802063 NA non-coding downstream 243718 33983207 ~ 33983551 (+)
G1802501 NA non-coding downstream 262908 34002397 ~ 34002692 (+)
G1802599 NA non-coding downstream 383026 34122515 ~ 34162841 (+)
G1800754 NA other upstream 801510 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 1341511 32317123 ~ 32374208 (+)
G1798597 NA other upstream 2418273 31293552 ~ 31297419 (+)
G1798579 NA other upstream 2423487 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2824625 30888661 ~ 30891067 (+)
LOC110501795 LOC106596205 other downstream 2000950 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2135073 35874562 ~ 35875452 (+)
G1805191 NA other downstream 2624107 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 2695511 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 4340377 38079807 ~ 38213191 (+)

Expression


Co-expression Network