G1804710


Basic Information

Item Value
gene id G1804710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 35626454 ~ 35627064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2064817
actgtatTGTGTGGTAGTAAAACATTCTCACTCATGGGTacaacaaatatagcctcttaaAAGGCACATCTTAAAATATGTTAATTAGACAGGTACTTTTTCTCCGCACACAatattttcccacaatgcaccatcatGAATTATGTAAACACATTTACTGTATTCTGCTGTGCATTCTAGTGTTTTACTGTTGAAATTACAGAAACGTCTTACAGTGTTTCACTGACCATGAGAAATTAAAGGTCCCgaacagtcaaaatcatgttttcttttgaaatgtgatattttgatgaaaccagatcaaagtaAGATGATCAAAGTATGAAAATGACTTTTGCTTCAGTATTGGTAAAGTTTGATTGTAAAGTTACATCAACTTTTGAATACATCAACATTTGAATACACACACCAATGGTAATGTCTTATTCTCTTCCCTAATTCAAATAAGCACCGCCTTGTAACCAATATTGCAGAAGTCATGTTAACAAAAGGGCGTGGTTTAAATAGTTAGGTAGCTTGTCTACTGGTGCCAAAATTTGACTGCAGCGTGTCAACAAAGATTATTTGTGATCAGCTATTCATCtaaggcagtggttcccaaactttttata

Function

NR:

description
PREDICTED: prostasin-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2064817 True 611 lncRNA 0.34 1 35626454 35627064

Neighbor

gene id symbol gene type direction distance location
LOC110502094 LOC106582301 coding downstream 155249 35138330 ~ 35471205 (-)
LOC110501791 LOC106582296 coding downstream 1033766 34585700 ~ 34592688 (-)
bard1 bard1 coding downstream 1082222 34473620 ~ 34544232 (-)
LOC110502093 LOC106582292 coding downstream 1642952 33951053 ~ 33983502 (-)
LOC110501786 LOC106586446 coding downstream 1698522 33687182 ~ 33927932 (-)
LOC110501794 ralb coding upstream 70522 35697586 ~ 35738804 (-)
tfcp2l1 tf2l1 coding upstream 466124 36093188 ~ 36102895 (-)
LOC110502096 LOC106582358 coding upstream 478983 36106047 ~ 36228129 (-)
nifk mk67i coding upstream 601297 36228361 ~ 36232090 (-)
LOC118943734 NA coding upstream 602242 36229306 ~ 36229431 (-)
G1804534 NA non-coding downstream 90832 35523937 ~ 35535622 (-)
G1804450 NA non-coding downstream 177788 35405231 ~ 35448666 (-)
G1803709 NA non-coding downstream 679753 34946365 ~ 34946701 (-)
G1803697 NA non-coding downstream 687425 34938824 ~ 34939029 (-)
G1803580 NA non-coding downstream 761296 34864859 ~ 34865158 (-)
G1804827 NA non-coding upstream 190340 35817404 ~ 35817865 (-)
G1804836 NA non-coding upstream 197449 35824513 ~ 35828447 (-)
G1804840 NA non-coding upstream 201767 35828831 ~ 35829042 (-)
G1804902 NA non-coding upstream 250368 35877432 ~ 35877693 (-)
G1805874 NA non-coding upstream 339325 35966389 ~ 35968196 (-)
G1803964 NA other downstream 499621 35126479 ~ 35126833 (-)
G1801331 NA other downstream 2665969 32958322 ~ 32960485 (-)
G1801352 NA other downstream 2672784 32950467 ~ 32953670 (-)
G1805927 LOC106582360 other upstream 430780 36057844 ~ 36059768 (-)
LOC110501806 sema5b other upstream 950684 36552698 ~ 36837583 (-)
G1806393 NA other upstream 1308594 36935658 ~ 36936087 (-)
G1806449 NA other upstream 1416497 37043561 ~ 37112474 (-)
G1807020 LOC105030512 other upstream 2132907 37759971 ~ 37760248 (-)

Expression


Co-expression Network