XLOC_037221 (senp7a)


Basic Information

Item Value
gene id XLOC_037221
gene name senp7a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 30211038 ~ 30213671 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073256
ATtttatcaTTACTGAAACCAAATGTTTTTGAAAAGATTCCTCAATTGCAGAACTTATCCTTAATTAATGTGTGTTTGAAGAATATGTCTGAGATTCTGTGTCGacttacaaatgtaaaaaaactgAAGCAGTTCAATTTATTGGATGATGCTCTGACTCACCTTCAGAACAACCTCACCAGTATTAAAATATTTCTGCATATGTTCAGATCAGATGATTTCCAATCTCTTTGTGCTTCAAAACCACATGCAGTCAAACAGATTTCTGTCATGAATTTAGGTCCTTATATAGATTATATAGTTTTCCGCCAATTTATATGCTTTGTAAATCttataaaactgtatttatgCAAAAATCTAATTTTTAACATAGAAGATTTTGCTTTTGTTGGACTGAATAAGCTGGAAGAGTTATACCTCTGTGACAACAAGTTATCTTATATTCATCAACACACATTCAGTGGCTTACATGAACTGACGGTTCTGGATCTCCAAGGAAATCATATAATTTACATTGAGCCAAAATCATTTGGACATTTTATTAACATTAGCACACTTCTGTTAGGATATATGAAATGTCTTCCTGACATGTCATTGATCAAGGTGAATTTATCTGATATATTTTATGGAATTCCATGTAATTTGAGCAATCTTTTCCTTAGTTCAGGCCTGAGACCAATGCATCTTGTGATCGGGAGTAATACTACACTGAATAATGGGCTAAACTTACAGATTAAAGGTCAATATCCGAACTTGGCCATCATGTTTCACAATCTGACCAAACTCCAGACTCTGATTCTGGCAAACTGCAGAATATTCTTTCTGGATGGAAGTCTGACCAAGGATTTAACCGCATTGAGAAAACTCATTCTTATCCCAACTAACACTGTCAACATTCTACAAACTTTTGTGGAACATCTCACTGATTTGGAGTATGTCTATTTTGAAGGCTTGGGTCTCTACTGCAGTTGTGATGATGCGTGGCTGGTCTCATGGGTGAAGGACAACAGAAAGGTGGAGGTTAGCATGTTAAACCCCACCATGCAAGATTTGCAGTGCTTGATTGACAATGAAGTTGACCAACTCAACTTTGTCAGTTTCGTCAAAGAAAACTGCTCATTTGACATTGAGTTTGTGTTCTTCGCCAGCACTGCTGTCTTTTTGTGCATCTTTATTGTTGTGGTCCTGATGTACAAATTTGTAGGCCAGTACTTCAAGCCGTTCTTTCACATCGCCAGCGGATGGTTTCGAGAGGTTTTGCATATGAAGAAGAAACAGCAGTACCGCTATGATGTTTTTGTGTCTTACAGCAGTAAGGATGAGCACTGGGTCATGGAGGAACTTCTTCCAAACTTAGAGCAGCGTGGACCTCCATTTTTGCGTATCTGTCTCCACAGTCGGGACTTTCAGTTGGGACACGACATTGTGGAAAACATCACAGACAGCATCTACGCAAGTCGCCGTACTCTTTGTCTCGTCAGTCAAAACTACCTCGGTAGCAACTGGTGCTCACTTGAGATGCAGCTGGCCACCTACCGGCTTCAGGTAGAACACAGAGACATTCTTATCCTGGTCTTCCTAGAAACCATTCCATCTCGCTTGCTTTCCTCCCATCACAGACTGGCCCGGCTGGTAAAAACTAGAACCTATCTGGACTGGCCACACGACCCGGAGAGGCATGAAGCATTCTGGCACAGGTTGTGGTGTAAACTGAGCTCTAGTAAAGCCAACTAG
>TCONS_00073257
CAGTACTTCAAGCCGTTCTTTCACATCGCCAGCGGATGGTTTCGAGAGGTTTTGCATATGAAGAAGAAACAGCAGTACCGCTATGATGTTTTTGTGTCTTACAGCAGTAAGGATGAGCACTGGGTCATGGAGGAACTTCTTCCAAACTTAGAGCAGCGTGGACCTCCATTTTTGCGTATCTGTCTCCACAGTCGGGACTTTCAGTTGGGACACGACATTGTGGAAAACATCACAGACAGCATCTACGCAAGTCGCCGTACTCTTTGTCTCGTCAGTCAAAACTACCTCGGTAGCAACTGGTGCTCACTTGAGATGCAGCTGGCCACCTACCGGCTTCAGGTAGAACACAGAGACATTCTTATCCTGGTCTTCCTAGAAACCATTCCATCTCGCTTGCTTTCCTCCCATCACAGACTGGCCCGGCTGGTAAAAACTAGAACCTATCTGGACTGGCCACACGACCCGGAGAGGCATGAAGCATTCTGGCACAGGTTGTGGTGTAAACTGAGCTCTAGTAAAGCCAACTAG

Function

symbol description
senp7a Predicted to enable signaling receptor activity. Predicted to be involved in inflammatory response and toll-like receptor signaling pathway. Predicted to act upstream of or within innate immune response and signal transduction. Predicted to be located in cytoplasm and membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115136

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073256 False 1734 mRNA 0.40 4 30211038 30213671
TCONS_00073257 True 528 mRNA 0.49 1 30213144 30213671

Neighbor

gene id symbol gene type direction distance location
XLOC_037220 senp7a coding upstream 4275 30204415 ~ 30206763 (+)
XLOC_037219 NA coding upstream 55758 30154784 ~ 30155280 (+)
XLOC_037218 tfg coding upstream 82278 30112423 ~ 30128760 (+)
XLOC_037217 jagn1a coding upstream 99933 30108641 ~ 30111105 (+)
XLOC_037216 col8a1a coding upstream 108260 30090656 ~ 30102778 (+)
XLOC_037222 NA coding downstream 34824 30248495 ~ 30249424 (+)
XLOC_037223 NA coding downstream 50686 30264357 ~ 30265423 (+)
XLOC_037224 rpgra coding downstream 60966 30274637 ~ 30288446 (+)
XLOC_037225 srpx coding downstream 80402 30294073 ~ 30316790 (+)
XLOC_037226 si:dkey-18p12.4 coding downstream 174245 30387916 ~ 30392745 (+)
XLOC_037214 BX649442.1 non-coding upstream 516839 29690678 ~ 29694199 (+)
XLOC_037212 NA non-coding upstream 541420 29662709 ~ 29669618 (+)
XLOC_037206 BX537139.2 non-coding upstream 692683 29518239 ~ 29518355 (+)
XLOC_037205 NA non-coding upstream 707263 29500107 ~ 29503775 (+)
XLOC_037232 BX571809.3 non-coding downstream 481612 30695283 ~ 30716906 (+)
XLOC_037236 NA non-coding downstream 1051203 31264874 ~ 31269143 (+)
XLOC_037237 NA non-coding downstream 1066730 31280401 ~ 31342609 (+)

Expression


Co-expression Network