Gene
RNA
| Item | Value |
|---|---|
| gene id | G1809372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 40127010 ~ 40128164 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2070120 | True | 344 | lncRNA | 0.46 | 2 | 40127010 | 40128164 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501865 | LOC106582395 | coding | downstream | 99857 | 39960431 ~ 40027153 (-) |
| tmem177 | tm177 | coding | downstream | 273641 | 39850855 ~ 39853369 (-) |
| LOC110502147 | LOC106582393 | coding | downstream | 279013 | 39736429 ~ 39847997 (-) |
| LOC110501861 | LOC106582392 | coding | downstream | 395896 | 39683220 ~ 39731114 (-) |
| ramp1 | LOC106582391 | coding | downstream | 446841 | 39590029 ~ 39680169 (-) |
| LOC118943637 | NA | coding | upstream | 155241 | 40283405 ~ 40284842 (-) |
| LOC110501872 | LOC106582401 | coding | upstream | 323433 | 40451597 ~ 40494774 (-) |
| LOC110501875 | LOC106582404 | coding | upstream | 547139 | 40675303 ~ 40684544 (-) |
| LOC110501878 | LOC106582406 | coding | upstream | 647044 | 40736648 ~ 40813437 (-) |
| LOC110501879 | LOC106586322 | coding | upstream | 707012 | 40835176 ~ 40882242 (-) |
| G1809337 | NA | non-coding | downstream | 43018 | 40080294 ~ 40083992 (-) |
| G1809313 | NA | non-coding | downstream | 89230 | 40037538 ~ 40037780 (-) |
| G1809307 | NA | non-coding | downstream | 95619 | 40031132 ~ 40031391 (-) |
| G1809304 | NA | non-coding | downstream | 101131 | 40025648 ~ 40025879 (-) |
| G1809297 | NA | non-coding | downstream | 114011 | 40012761 ~ 40012999 (-) |
| G1809405 | NA | non-coding | upstream | 42228 | 40170392 ~ 40183895 (-) |
| G1809410 | NA | non-coding | upstream | 56281 | 40184445 ~ 40185458 (-) |
| G1809418 | ccnt2 | non-coding | upstream | 69431 | 40197595 ~ 40200422 (-) |
| G1809427 | NA | non-coding | upstream | 82525 | 40210689 ~ 40210912 (-) |
| G1809446 | NA | non-coding | upstream | 96492 | 40224656 ~ 40224887 (-) |
| G1808299 | NA | other | downstream | 1182480 | 38944136 ~ 38944530 (-) |
| LOC110502145 | LOC106586333 | other | downstream | 1514723 | 38520872 ~ 38726596 (-) |
| G1807731 | NA | other | downstream | 1913823 | 38208790 ~ 38241273 (-) |
| G1807750 | LOC106582372 | other | downstream | 1931914 | 38193422 ~ 38195096 (-) |
| G1807020 | LOC105030512 | other | downstream | 2366762 | 37759971 ~ 37760248 (-) |
| LOC110501886 | rhg15 | other | upstream | 1319735 | 41447899 ~ 41523764 (-) |
| G1811042 | NA | other | upstream | 1476810 | 41604974 ~ 41605231 (-) |
| G1812079 | LOC106582433 | other | upstream | 2258658 | 42386822 ~ 42389273 (-) |
| LOC110502155 | psd12 | other | upstream | 2476539 | 42603998 ~ 42605768 (-) |
