LOC110501865 (LOC106582395)


Basic Information

Item Value
gene id LOC110501865
gene name LOC106582395
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39960431 ~ 40027153 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959077.1
ATGGGGAGTGCTGTGATGGGGAGTGCTGTGATGGGGAGTGCTGTGATGGGGAGTGCTGTGATGGGGAGTGCTGGTGGATCTGAGGAGAGCCTGACAGCAGAGGAGCAGATGTACATTCTTTATGACATTAAACTCCAGTGTCACCAGAACCTCTCCACCCGCAACCCAGCCGATGATCTCTGCCCCCCTGGTTGGGATGGCCTTATCTGCTGGCCACAGGGTTACCCAGGAGCTGTCACCAAGGTCCTCTGCCCCAGCTACATCTTTGACTTCAACCACAAAGgtcATGCCTACAGGAAGTGTGACATCAATGGGTCGTGGGTGTTTGTGGAGAGCCTGAACAGGACGTGGCCTAACTACTCAGAGTGTCTGGGCCCTGGGTTCTTGAAGCCAAGCAACGAGAGGGGGAAACAGGACTTCTTTGAGCGTCTGTATGTCATGTACACCGTAGGCTACGCTGTGTCCTTCAGCTCTCTACTAGTGGCTATCTTCATCATCGGATATtttagGCGTCTCCACTGTACCAGGAACTACATCCACATCCACCTGTTTGTCTCCTTCATGCTCCGAGCTGTCAGCATCTTCGTCAAAGACCGGGTGGTGCACACCAGCGCCGGCCTGCAGGAGTTTGATGCCGTGCTCATGGATAACTTCAAGACTGTGGCCATGGCTCCGCTGGATAACTCTCAGTATattggGTGTAAAGTGACAGTGTTGCTGTTCATCTACTTCCTGGCCACTAATTACTACTGGATCCTGGTAGAGGGTCTGTACCTCCACAGCCTCATCTTCATGGCCTTCCTCTCAGACACCAAGTACCTGTGGGGCTTCACCCTCATCGgatgggGTGTTCCAGCTCTGTTCGTGGCAGCATGGGCAGTTGTCCGGGCAACATTAGCAGACGGAAGGTGCTGGGAGTTAAGTGCTGGGAACATTAAGTGGATATACCAAGTCCCCATTCTGACAGCCATTGGGCTGAATTTTATCCTTTTTGTGAACATTGTGCGAGTGCTGGCAACAAAGATCAGGGAGACCAACGCAGGGAGATACGACACAAGAAAACAGTACAGGAAGTTGGCTAAGTCCACcctggtgctggtgctggtgtTTGGGGTCCACTACATTGTGTTTGTGGGGATGCCTCACACCTTCCAGGGCCTCAGCTGGGAGGTCAGGATGTACTTCGAGCTCTTCTTCAACTCCTTCCAGGGCTTCTTTGTATCCATCATCTACTGCTACTGCAATGGAGAGGTCCAAACGGAGATAAAAAATACATGGACTCGTTGGAACCTTGCGTTGGACTGGAAGGTTCCGGTAGTGTGTGGACGTTACCGCTACGGCTCAGTGCTCACCGGGCTCAACAACAGCTCCAGCAGCCAGTCTCAGCTGGCTGGGGGTGGCCCCGCCATCCGCTCAACCACCCTCTTCTCCAGCCGTGTCTATCGTAGCAACGGACCCCCGACGCTGTCCACCCACACCACCCTGCCTGGCTACGTCATCAGTAACTCAGACCCAGACAGcgtccacccctccatccctgaGGAACCAGAGGAGAACAGTGCCAAGCAGGTGGATGACATCTCTCTGAAGGAGACGATGCCTGTCCTCAATAATAGTACGACCgcagatgatgatgaggagaCGTTGTAGACATGGGGAGAGACGGGAGGTTTTTCTGAATGTGACTGAGCTGGGAAAAACAACAGGCCTTTGGGATAGAGACCAAAGACTACTGGCCCCTAGACATGGGACCACATGTAAATTCATACAGATTATTGGCACAGGTAGATATATACatgtaaagacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
parathyroid hormone 2 receptor-like isoform X1

GO: NA

KEGG:

id description
K04586 PTHR2; parathyroid hormone receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959077.1 True 1849 mRNA 0.53 13 39960431 40027153

Neighbor

gene id symbol gene type direction distance location
tmem177 tm177 coding downstream 107062 39850855 ~ 39853369 (-)
LOC110502147 LOC106582393 coding downstream 112434 39736429 ~ 39847997 (-)
LOC110501861 LOC106582392 coding downstream 229317 39683220 ~ 39731114 (-)
ramp1 LOC106582391 coding downstream 280262 39590029 ~ 39680169 (-)
LOC118943588 NA coding downstream 518915 39437199 ~ 39441516 (-)
LOC110501866 LOC106582396 coding upstream 57304 40084457 ~ 40170141 (-)
LOC118943637 NA coding upstream 256252 40283405 ~ 40284842 (-)
LOC110501872 LOC106582401 coding upstream 424444 40451597 ~ 40494774 (-)
LOC110501875 LOC106582404 coding upstream 648150 40675303 ~ 40684544 (-)
LOC110501878 LOC106582406 coding upstream 748055 40736648 ~ 40813437 (-)
G1809115 NA non-coding downstream 30623 39929515 ~ 39929808 (-)
G1809109 NA non-coding downstream 33267 39924687 ~ 39927164 (-)
G1809065 NA non-coding downstream 83151 39876951 ~ 39877280 (-)
G1809034 NA non-coding downstream 150431 39809321 ~ 39810000 (-)
G1809012 NA non-coding downstream 189619 39770447 ~ 39770812 (-)
G1809307 NA non-coding upstream 3979 40031132 ~ 40031391 (-)
G1809313 NA non-coding upstream 10385 40037538 ~ 40037780 (-)
G1809337 NA non-coding upstream 53141 40080294 ~ 40083992 (-)
G1809372 NA non-coding upstream 99857 40127010 ~ 40128164 (-)
G1809405 NA non-coding upstream 143239 40170392 ~ 40183895 (-)
G1808299 NA other downstream 1015901 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 1348144 38520872 ~ 38726596 (-)
G1807731 NA other downstream 1747244 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 1765335 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 2200183 37759971 ~ 37760248 (-)
LOC110501886 rhg15 other upstream 1420746 41447899 ~ 41523764 (-)
G1811042 NA other upstream 1577821 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 2359669 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 2577550 42603998 ~ 42605768 (-)

Expression


Co-expression Network