G1809034


Basic Information

Item Value
gene id G1809034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39809321 ~ 39810000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2069759
actcttactgatgcTGCTTATCGATCCGGTattttaacggtattactactcttactgatgctgcttatcgatccggtactttaacggtattactactcttactgatgctgcttatcgatccggtactttaacggtattactactcttactgatgctgcttatcgatccggtactttaacggtattactactcttactgatgctgcttatcgatccggtactttaacggtattactactcttactgatgctgcttattgatccggtactttaacggtattactactcttactgatgctgcttatcgatccggtactttaacggtattactactcttactgatgctgctgatgctgctgatgatgctgatgatgcttgctttattttctgaaatgtaaaatatatcaaaTAAACTATTATATACAGCAAAAGAAACAGCAATGTTTTTAACTAAACATTATAATTATAGACTCTAATGTTGTGGTGATAGTAATGCAAAACAAATTACAACAATATTTTCCTGCAGAAGATAAGACAGgggtatagagcaacacgggtggggcctgcaggtaagGCTGCAGAAGGACTATACAGGGGTATAGAGCTACACGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2069759 True 611 lncRNA 0.38 2 39809321 39810000

Neighbor

gene id symbol gene type direction distance location
LOC110501861 LOC106582392 coding downstream 78207 39683220 ~ 39731114 (-)
ramp1 LOC106582391 coding downstream 129152 39590029 ~ 39680169 (-)
LOC118943588 NA coding downstream 367805 39437199 ~ 39441516 (-)
LOC110502146 LOC106582388 coding downstream 372855 39429672 ~ 39436466 (-)
klf7b klf7 coding downstream 654551 38998682 ~ 39154770 (-)
tmem177 tm177 coding upstream 40855 39850855 ~ 39853369 (-)
LOC110501865 LOC106582395 coding upstream 150431 39960431 ~ 40027153 (-)
LOC110501866 LOC106582396 coding upstream 274457 40084457 ~ 40170141 (-)
LOC118943637 NA coding upstream 473405 40283405 ~ 40284842 (-)
LOC110501872 LOC106582401 coding upstream 641597 40451597 ~ 40494774 (-)
G1809012 NA non-coding downstream 38509 39770447 ~ 39770812 (-)
G1809004 NA non-coding downstream 56091 39752989 ~ 39753230 (-)
G1808969 NA non-coding downstream 106796 39701208 ~ 39702525 (-)
G1808911 NA non-coding downstream 233403 39574480 ~ 39575918 (-)
G1808628 NA non-coding downstream 354187 39454521 ~ 39455134 (-)
G1809065 NA non-coding upstream 66951 39876951 ~ 39877280 (-)
G1809109 NA non-coding upstream 114687 39924687 ~ 39927164 (-)
G1809115 NA non-coding upstream 119515 39929515 ~ 39929808 (-)
G1809296 NA non-coding upstream 200723 40010723 ~ 40011196 (-)
G1809297 NA non-coding upstream 202761 40012761 ~ 40012999 (-)
G1808299 NA other downstream 864791 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 1197034 38520872 ~ 38726596 (-)
G1807731 NA other downstream 1596134 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 1614225 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 2049073 37759971 ~ 37760248 (-)
LOC110501878 LOC106582406 other upstream 926648 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 1637899 41447899 ~ 41523764 (-)
G1811042 NA other upstream 1794974 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 2576822 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 2794703 42603998 ~ 42605768 (-)

Expression


Co-expression Network