G1809932


Basic Information

Item Value
gene id G1809932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40645562 ~ 40646599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2070743
tgagacctgggacaccaggtgggtgattcccctctaatcagggactgattgagacctgggacaccaggtgggtgattcccctctaatcagggactgattgagacctgggacaccaggtgggtgcaattaattatcaggtagaacagaaaatcaGCAGGCTCTgaacctcgtagggtaagagttgaatacccctgcccTTGATTGAGGTATGAACAGTGACACACCAGTCAGAGCACTCATCCCTCTGACCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2070743 True 252 lncRNA 0.52 2 40645562 40646599

Neighbor

gene id symbol gene type direction distance location
LOC110501874 LOC106582403 coding upstream 86813 40550073 ~ 40558749 (+)
nmi LOC106582386 coding upstream 144904 40494866 ~ 40500658 (+)
ubxn4 ubxn4 coding upstream 196084 40439164 ~ 40449478 (+)
LOC110501870 r3hdm1 coding upstream 227315 40357947 ~ 40418247 (+)
LOC110501877 LOC106582405 coding downstream 99283 40745882 ~ 40758226 (+)
LOC110501885 LOC106582417 coding downstream 639887 41286486 ~ 41363126 (+)
LOC110502150 NA coding downstream 880383 41526982 ~ 41528136 (+)
LOC110502132 clm8 coding downstream 1294598 41941197 ~ 41943225 (+)
LOC110501889 LOC106582433 coding downstream 1609818 42256417 ~ 42389468 (+)
G1809914 NA non-coding upstream 16609 40628740 ~ 40628953 (+)
G1809857 NA non-coding upstream 17988 40577423 ~ 40627574 (+)
G1809847 NA non-coding upstream 75873 40569404 ~ 40569689 (+)
G1809843 NA non-coding upstream 77476 40567847 ~ 40568086 (+)
G1809838 NA non-coding upstream 84321 40561013 ~ 40561241 (+)
G1809961 NA non-coding downstream 21880 40668479 ~ 40668702 (+)
G1810169 NA non-coding downstream 187958 40834557 ~ 40834898 (+)
G1810171 NA non-coding downstream 188557 40835156 ~ 40835395 (+)
G1810177 NA non-coding downstream 200589 40847188 ~ 40847454 (+)
G1810181 NA non-coding downstream 206829 40853428 ~ 40853668 (+)
G1809107 NA other upstream 720167 39924414 ~ 39925395 (+)
G1808787 NA other upstream 950694 39693913 ~ 39694868 (+)
G1808209 NA other upstream 1494229 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1782426 38862740 ~ 38863136 (+)
G1807376 NA other upstream 2234399 38406137 ~ 38411163 (+)
G1810553 NA other downstream 543090 41189689 ~ 41192492 (+)
G1810740 NA other downstream 817879 41464478 ~ 41466349 (+)
G1812428 NA other downstream 2077073 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2083002 42688215 ~ 42735867 (+)

Expression


Co-expression Network