G1810553


Basic Information

Item Value
gene id G1810553
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 41189689 ~ 41192492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2071418
GTTCACATGGAATGACCCGACTTTTTTCTTTCACGAGACTGCATCAGATAAAGTTAAATAGCTGTTTGAGGTGATCTCAGCAAATGGTCAAATGAAAGAGATCTGgaacagagtcagacagacaagcTTTATCAGATTAGGAAATTGGGGCACAATTTCCCTTAAGAGGATACAATTCAGCTGTAGCTTAAAAACTCTTATACACTGAGGCCTGCTGTCCAAGACAGTTCAGTTCAGTGCTGTTGCCTATAACCAGAACACACTAATAATAATGTACAGAGGGTTAGTTCCACACAACACTAGTCATGTACACAGGTTTAGTTCAACACACCACTAGTCATGTACACAGGGTTAGTTCTATACACTACTAGTAATGTACACAGGGTTAGTTCCACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCCACACACTACTAGTCATGTACACAGGGTTAGTTCTACACAATGCTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGTGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACAATGCTAGTCATGTACACAGGGTTAGCTCTACACACTACTAGTCATGTACACAGGGTTAGTTCTACACACTACTAGTCATGTACACAGGGTTGGTTCTACACAATGCTAGTCATGTACATAGAGTTTGGGTTAAGATTACTTCCAGCTTAATTCCGTTGATCTATATGCATGCTTACACGTGGGTGGAGTGGGACTTTTGGAGTAGCAGACAGCTTTTTGGTAACACGATATCCTCGCCGTTCCCACCCCATTCACAAAGGcaatttttttagtttttttgtctTTTCATTTTGTGAAAACAAGGAAGAGTCACCTTCCCTTGCttatagtagctagctagtagccTGGTTAGCTGGCTTAAAAATGGATTCTTGTTGTTTGGTTTACTGTTTGAACAGTCGCTGAGATATTATATTTGGTTATCAATGCAAATAGGCTACTTAGATGAATAGCCTATATAGCCTATAGATCAGATCAAGGAACCAAGTGATAACACTGCCTCCACGGCTGCTGAACTAATGATACGGCGTGTCTCAATTTTCAGATAACAAAAAAGTATGTTGAATGCTGGAGCGTATTACAAGAAGCCTCCCCTTTTGTGGCAAACACTTTCATTGCAGCACTCCGAACCTTGCATCTGCGTATAGTTTGTAGTAAGCTTTAGGGTTAGAACTACACACTACTAGTCATATACACAGAgtttgggttagggtaagggttaaggtgtcagcatgcttcagttcggctggccTCTCTGGACTTTCTAGCCTCTCTGGCTTCTATGCTTCTCTGGACTCACTGGTCTCTCTGGACTCTCTGGACACTCTGGTCTCTGGACTCTCGGGGCTCTAAAgcttctctggtctctctgttctctatggCCTCTCTGGACTCTCTGGCATCGCTGGCCTCCGTGGGCTCTAAAGCATCTCTGGACTCTCTGGCCTCTAAAGGCTCTCTGGGCTCTCTGGCCTCTCTgggctctcttgtctctctggtctctaaaGCCTCTCTGGACTCTCTgaactctctggtctctctggccTCCCTGGTCTCCCAGGCCTCTCTGGCCTCTCTGGACTCCCTggcctctctggtctctctggacTCTCTGGGCTCTAAAGTTTCTCTTCACTATCTGGACTCTCTGGACTCGCTGGACTCTCTGGCCTCTATTGGCTCTCTGGACTCTCTGGGATCTCTGgtatctctggtctctctggacTCTAAAGCCTCTCTGGactctctcgtctctctggcTTCTAAAGCCTCTCTGGATTCTCTGGTTTCTCTGGCCTCTAAAGCCTTTCTGCACTCGCTGGTCTCTCTGGACTCTCCTGTCTCTAAAGTCTCTCTGgactctcttgtctctctggCCTCTAAAGCCTCTCTGGACTCTCGGGTCTCTCTGGCCTCTCTGGGCTCTCTGGCATCTTTggactctctggtctctctggacTCTAAAGCTTCTCTGGCCTCTCCGGACTCTCTGGTATTGCTGGTCTCCCTGGTGTCTAAAGCGTCTCTGGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2071418 True 2270 TUCP 0.46 4 41189689 41192492

Neighbor

gene id symbol gene type direction distance location
LOC110501877 LOC106582405 coding upstream 431463 40745882 ~ 40758226 (+)
LOC110501874 LOC106582403 coding upstream 630940 40550073 ~ 40558749 (+)
nmi LOC106582386 coding upstream 689031 40494866 ~ 40500658 (+)
ubxn4 ubxn4 coding upstream 740211 40439164 ~ 40449478 (+)
LOC110501870 r3hdm1 coding upstream 771442 40357947 ~ 40418247 (+)
LOC110501885 LOC106582417 coding downstream 93994 41286486 ~ 41363126 (+)
LOC110502150 NA coding downstream 334490 41526982 ~ 41528136 (+)
LOC110502132 clm8 coding downstream 748705 41941197 ~ 41943225 (+)
LOC110501889 LOC106582433 coding downstream 1063925 42256417 ~ 42389468 (+)
LOC110501894 glpc coding downstream 1319481 42511973 ~ 42550970 (+)
G1810551 NA non-coding upstream 1457 41187953 ~ 41188232 (+)
G1810525 NA non-coding upstream 27698 41161695 ~ 41161991 (+)
G1810495 NA non-coding upstream 54810 41134645 ~ 41134879 (+)
G1810492 NA non-coding upstream 55921 41133463 ~ 41133768 (+)
G1810476 NA non-coding upstream 74530 41114914 ~ 41115159 (+)
G1810556 NA non-coding downstream 904 41193396 ~ 41193671 (+)
G1810569 NA non-coding downstream 10444 41202936 ~ 41203203 (+)
G1810577 NA non-coding downstream 26392 41218884 ~ 41219972 (+)
G1810581 NA non-coding downstream 31922 41224414 ~ 41224708 (+)
G1810584 NA non-coding downstream 37605 41230097 ~ 41230322 (+)
G1809107 NA other upstream 1264294 39924414 ~ 39925395 (+)
G1808787 NA other upstream 1494821 39693913 ~ 39694868 (+)
G1808209 NA other upstream 2038356 39149080 ~ 39151333 (+)
G1807566 NA other upstream 2326553 38862740 ~ 38863136 (+)
G1807376 NA other upstream 2778526 38406137 ~ 38411163 (+)
G1810740 NA other downstream 271986 41464478 ~ 41466349 (+)
G1812428 NA other downstream 1531180 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 1537109 42688215 ~ 42735867 (+)
G1812953 NA other downstream 1957270 43149762 ~ 43150384 (+)

Expression


Co-expression Network