G1812953


Basic Information

Item Value
gene id G1812953
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43149762 ~ 43150384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074041
ggatatttcaaactttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaggactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcatttaaagtttgccacaagccacctgggagacacaccaaacatgtggaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatcccaacggtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074041 True 623 TUCP 0.44 1 43149762 43150384

Neighbor

gene id symbol gene type direction distance location
LOC110501901 LOC106582440 coding upstream 111768 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 415200 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 464654 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 598792 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 760294 42256417 ~ 42389468 (+)
LOC110501905 LOC106582444 coding downstream 63456 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 80040 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 196419 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 351409 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 400088 43550472 ~ 43572947 (+)
G1812930 NA non-coding upstream 14209 43135337 ~ 43135553 (+)
G1812915 NA non-coding upstream 27528 43122006 ~ 43122234 (+)
G1812896 NA non-coding upstream 40647 43108800 ~ 43109115 (+)
G1812895 NA non-coding upstream 40982 43108516 ~ 43108780 (+)
G1812882 NA non-coding upstream 51602 43097941 ~ 43098160 (+)
G1813008 NA non-coding downstream 50663 43201047 ~ 43201301 (+)
G1813017 NA non-coding downstream 59743 43210127 ~ 43210763 (+)
G1813071 NA non-coding downstream 133889 43284273 ~ 43291106 (+)
G1813123 NA non-coding downstream 208050 43358434 ~ 43359555 (+)
G1813094 NA non-coding downstream 235577 43385961 ~ 43389375 (+)
G1812428 NA other upstream 425648 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1683413 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1957270 41189689 ~ 41192492 (+)
G1813442 NA other downstream 957860 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1167774 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1212277 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1348073 44498457 ~ 44508051 (+)
LOC110501918 LOC106582467 other downstream 1416504 44566863 ~ 44573921 (+)

Expression


Co-expression Network