G1815578


Basic Information

Item Value
gene id G1815578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45781758 ~ 45782507 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077100
cattgactctgtaccggtaccccctgtatataacctccacattgactctgtaccggtacccctgtatatagcctccacattaactctataccggtaccccctgtatatagcctccacattgactctgtaccggtacaccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccagtaaaccctgtatatagcctccacattgactctgtaccagtaaaccctgtatatagcctccacattgactctgtaccagtaaaccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatggcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtacaccctgtatatagcctccacattgactctgtaccggtactccctgtatatagcttccacattgactctgtaccggtactccctgtatatagtctccacattgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077100 True 593 lncRNA 0.48 2 45781758 45782507

Neighbor

gene id symbol gene type direction distance location
LOC110501932 LOC106582487 coding downstream 55364 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 194046 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 202852 45550854 ~ 45578906 (-)
LOC110501935 gdf3 coding downstream 237768 45533097 ~ 45543990 (-)
LOC118943614 gdf3 coding downstream 260926 45519847 ~ 45520832 (-)
LOC118943596 NA coding upstream 228608 46011115 ~ 46028506 (-)
ints6 LOC106582497 coding upstream 336881 46119388 ~ 46156972 (-)
spopla spopl coding upstream 1087324 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 1259718 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 1304364 47086871 ~ 47103828 (-)
G1815575 NA non-coding downstream 5250 45776242 ~ 45776508 (-)
G1815573 NA non-coding downstream 10677 45770807 ~ 45771081 (-)
G1815572 NA non-coding downstream 12039 45769489 ~ 45769719 (-)
G1815562 NA non-coding downstream 20296 45761186 ~ 45761462 (-)
G1815544 NA non-coding downstream 84210 45696092 ~ 45697548 (-)
G1815604 NA non-coding upstream 15127 45797634 ~ 45797878 (-)
G1815605 NA non-coding upstream 16471 45798978 ~ 45799596 (-)
G1815715 NA non-coding upstream 85346 45867853 ~ 45868099 (-)
G1815720 NA non-coding upstream 97827 45880334 ~ 45880534 (-)
G1815725 NA non-coding upstream 108475 45890982 ~ 45891238 (-)
G1814480 NA other downstream 1107870 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1228338 44473683 ~ 44553607 (-)
G1812404 NA other downstream 3103998 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 3176738 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 3392485 42386822 ~ 42389273 (-)
G1815615 LOC106582489 other upstream 56243 45838750 ~ 45840982 (-)
G1816841 NA other upstream 1443044 47225551 ~ 47226646 (-)
G1816929 NA other upstream 1618615 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1688787 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 2279542 48057851 ~ 48064453 (-)

Expression


Co-expression Network