Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815572 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45769489 ~ 45769719 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077091 | True | 231 | lncRNA | 0.31 | 1 | 45769489 | 45769719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501932 | LOC106582487 | coding | downstream | 43095 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 181777 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 190583 | 45550854 ~ 45578906 (-) |
| LOC110501935 | gdf3 | coding | downstream | 225499 | 45533097 ~ 45543990 (-) |
| LOC118943614 | gdf3 | coding | downstream | 248657 | 45519847 ~ 45520832 (-) |
| LOC118943596 | NA | coding | upstream | 241396 | 46011115 ~ 46028506 (-) |
| ints6 | LOC106582497 | coding | upstream | 349669 | 46119388 ~ 46156972 (-) |
| spopla | spopl | coding | upstream | 1100112 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 1272506 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 1317152 | 47086871 ~ 47103828 (-) |
| G1815562 | NA | non-coding | downstream | 8027 | 45761186 ~ 45761462 (-) |
| G1815544 | NA | non-coding | downstream | 71941 | 45696092 ~ 45697548 (-) |
| G1815523 | NA | non-coding | downstream | 112487 | 45656557 ~ 45657002 (-) |
| G1815516 | NA | non-coding | downstream | 126093 | 45640215 ~ 45643396 (-) |
| G1815488 | NA | non-coding | downstream | 173790 | 45592185 ~ 45595699 (-) |
| G1815573 | NA | non-coding | upstream | 1088 | 45770807 ~ 45771081 (-) |
| G1815575 | NA | non-coding | upstream | 6523 | 45776242 ~ 45776508 (-) |
| G1815578 | NA | non-coding | upstream | 12039 | 45781758 ~ 45782507 (-) |
| G1815604 | NA | non-coding | upstream | 27915 | 45797634 ~ 45797878 (-) |
| G1815605 | NA | non-coding | upstream | 29259 | 45798978 ~ 45799596 (-) |
| G1814480 | NA | other | downstream | 1095601 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 1216069 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 3091729 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 3164469 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 3380216 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 69031 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 1455832 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 1631403 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 1701575 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2292330 | 48057851 ~ 48064453 (-) |
