G1815772


Basic Information

Item Value
gene id G1815772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45981643 ~ 45982415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077320
TAGTAAATAGTTTGACAGCATCTTAAGATACAATTCTAATGCAGGGATCTCCTGCTCCAGTCCAGTAGTGACTGGTTCTACAGGCTTGTATTGTAGTCCAGCACTAACATGTCTGATTCAAAATATCAAGGTCCAGGCTGAAGATCATCATTAGTAGATAATTTGACACAGGTTTGTTATTGCTATTGATGTTTGTCTGCCAGAGTGATAATACGACATGAGAACAATTCTACAGCCAAATCAGGGTGGGGCAGCTGATATAGATAAACTCTAAAACATATTGATCATGAAGGAACGCCTGGGGTGACAAATGTTATAAATGTCTCTTCATAATTATACAACGATCAGAGTTTTTCAGTTTGGTATCTTTAGTACAAGCAATAGGAAAGTGGTCCCTgaaatcatttttaaaaacacCACTGTCCAAGCTCTTATGGAGTCAATTTGTCAGGATTAGGTCAACCAGCGAAGAGTTTGAAGATAATTTTTTTCCATGAATACCTGTGGGTTTGGAAATCAGAAGAGTCAGGTTAAAGTCAGGCTTGATACTCACATATCGTAGTTTCGCTGAGAGTCAAGGATCCTCTGCAAACCAATTTGGCAATGATGGCAAAAGCAGTAAGCAGCAGGCTATTTAAAGGCTGCAGACACTGAAAGTGAAAGTGACCTCCTGTCTTATGAACTCTTTCATTATCGAAGTTATACAATAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC109204916

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077320 True 710 lncRNA 0.38 2 45981643 45982415

Neighbor

gene id symbol gene type direction distance location
LOC110501932 LOC106582487 coding downstream 255249 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 393931 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 402737 45550854 ~ 45578906 (-)
LOC110501935 gdf3 coding downstream 437653 45533097 ~ 45543990 (-)
LOC118943614 gdf3 coding downstream 460811 45519847 ~ 45520832 (-)
LOC118943596 NA coding upstream 28700 46011115 ~ 46028506 (-)
ints6 LOC106582497 coding upstream 136973 46119388 ~ 46156972 (-)
spopla spopl coding upstream 887416 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 1059810 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 1104456 47086871 ~ 47103828 (-)
G1815703 NA non-coding downstream 38723 45942401 ~ 45942920 (-)
G1815705 NA non-coding downstream 42842 45938515 ~ 45938801 (-)
G1815751 NA non-coding downstream 47506 45933693 ~ 45934137 (-)
G1815750 NA non-coding downstream 49535 45931878 ~ 45932108 (-)
G1815747 NA non-coding downstream 52939 45928467 ~ 45928704 (-)
G1815781 NA non-coding upstream 27041 46009456 ~ 46009674 (-)
G1815899 NA non-coding upstream 46158 46028573 ~ 46028927 (-)
G1815902 LOC106582500 non-coding upstream 51699 46034114 ~ 46064332 (-)
G1815909 NA non-coding upstream 61920 46044335 ~ 46045898 (-)
G1815931 NA non-coding upstream 107237 46089652 ~ 46117078 (-)
G1815615 LOC106582489 other downstream 140661 45838750 ~ 45840982 (-)
G1814480 NA other downstream 1307755 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1428223 44473683 ~ 44553607 (-)
G1812404 NA other downstream 3303883 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 3376623 42603998 ~ 42605768 (-)
G1816841 NA other upstream 1243136 47225551 ~ 47226646 (-)
G1816929 NA other upstream 1418707 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1488879 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 2079634 48057851 ~ 48064453 (-)
G1817668 NA other upstream 2286372 48268787 ~ 48291496 (-)

Expression


Co-expression Network