XLOC_037846 (epc2)


Basic Information

Item Value
gene id XLOC_037846
gene name epc2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 25347814 ~ 25366541 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074293
TGCGCGCGCAGCGGCACACGCGCGCTCCCGCTCACGCTCTTTGGCAGTGTCGCGCGGGCTGTCGGGATCATGTCCGCCATGTTTTCACACCAGCCGAGAAAAAAAAGCCCGTGAAAAAACACCACAACTCGCTCAGAGATGCCTTTAACCGTCGGATTTCGATCGGAGGGAAGTCAGTGAGCGCGGCCGCGGAGAAAACCGTCGGCTCGTGTGTGTATTTGTACCGAATGATCCGTGTTCTGTGTATTTGTGATCGCTGAAAACAATGAGTAAACTCTCGTTCCGCGCGCGAGCGCTAGACGCCGCCAAACCGCTGCCCATCTACCGCAATAAAGACCTCCCGGACCTCACCGACTGCGTCTCCATCAACCGAGCGGTCCCACAAATGCCAACCGGGATGGAAAAGGAAGAGGAGTCGgagCACCATCTCCAGAGGGCCATCTCTGCCCAGCAGGTGTTCAGGGAAAAGAAGGAGAGCATGGTCATCCCTGTGCCGGAGGCTGAGAGTAACATCACCTATTACGACCGTCTGTATAAAGGAGAATTTCGCATCCCCAAACAGCTCATCCACATCCAGCCTCTTGGTTTGGATAACGAGCTACCCGACTATGACATGGACTCAGAGGACGAGACTTTACTAAACAGACTCAACCGTAAGATGGAGCTAAAACCTGTGCAGTTTGAGACCATGATGGACCGGTTGGAGAAAGCCAGTACCAACCAGTTGGTCACTCTTCAAGAGGCCAAGCTGCTGCTAAATGAAGATGACTACCTGTTGAAGTCTGTGTATGACTACTGGGTGAGGAAGAGGAAGAACTGCCGGGGGCCGTCTCTTATCCCACAAATCAAGCAGGAGAAGAGGGATGGTTCCACCAACAGTGATGCTTACGTGGCCTTCAGGCGTCGCACAGAGAAGATGCAGACTAGAAAGAATCGCAAGAATGACGAGGCATCTTATGAGAAGATGCTGAAGCTGAGGAGAGAGTTCAGCCGAACCATAAGCATCCTGGAAATGATCAAGAAAAGAGAAAAGAGCAAACGAGagctgctgcatctgacgctggAAGTCTTTGAAAAAAGATATCAGATTGGAGACTTCTCTGGTGAGATTCTCAATGAAGTCACTGTACCTCTGGCTGAGAAAACCGTTTACCCTGCTCCCATATCCCTACCCATCAGCAGTCGGCACAAGACAGAgaacaaaattaagtCACACAAAATTGGGCCCAAACACCTGCACCCCTTTCCCGTTAAGTCTGAGCCTCATTTTGACTTTGTGCGTTCTCATAAGAAGTACAACAAGAGGCCCAAACTTGATACGTTTCGCCAGACTGGTTGGCCAGAGCGAATACAGACCATTAACAAGGCAGACATTAAACAGTACGACTTCCACAGCTCTGGAGAAGAGGATTATCCACTGTCTCCAGCATCAGAGCCAGATGAAGAGAACGATCCTGACGGAGTCTTTGCCTTCAGACGGAAAGCTGGCTGCAGTTACCATGCTCCGGTGGTGGATCAGAGCTGTTCTCCTCATTGGCAGCAGACGGGTCAGGATCAGCTGTGGCAGCGGAACTGTCTCACTGCCCTCTCTGTGCCTAGACGGTGCATCGCAGTGGCTTGTAGGAGAGTGGGCAGAGGTGGCAGGGTTGTTTTGGATCGCACCTCATCAGATCTGGATCATTCCCTCGGGCACCTGGACCCTGATATGCTTTATCCCTCCTCCGGCTCATGTGTGCCTGACCTCCCCGTCCACACAAATACAAACTCTCACGTCTCGCAACGCTCTCTGACTCAGCTTCTCGGTGACATCCAGGCCTGCAGGTGGAAGTTTTTTCGGCCTCGGCCGCTGCAGGACAACTCTAGGGCTGAGGACAAGAAAGGGACCCCGCCGGTGGAAAAAGGTGGAGGGACGACACTCTCTAACAGCGTGTCAGGTGGATTCACAGAAGAGCAGTTTCAGTCCCATCAGCAGCAGCTGGTTCACATGCACAAACAGTTACAGCAGCAAGAACTGCAGCAGAACTCCACAGCAGCAGAAGCTCACTTACACCTGCATACTCTGGACTCGGCTGGTGCTCATTTTGCTGCCTCTGCTGTGATCAACACTCCCAACAATGAAAACAGACCCCAGATTGCTAGTGTCAATGGCGTCCTTCCCAATTCAGGAAGCTTCAGACAAGTCAAAGTGAACCGTTCAGCTCCGAGTGGAGGTGGTGGTGCTGGTGGTGAATTAGGCTCTTTAGTGCGGAGTCCACAGCTGGCCGTCCCTCAGTCTCTGCCCCACGGACACGGGCACCTGAGCACTGTGAGCGCTGTGTCTCCTGCCCACACGCACCACACGGCTCGCCTCTGTGCCCCTTCACCCTCAGCCTTAAAACTGGCCAGTGTCGCCAGCAGTCTGGACCGGGTACCCAAAGTCACCCCCACTAGTGCCATCGACATTGCCAGGGAGAATCACGAACCAGAGAGGCTGGCTCTCAATGGATTATCAGAGACAACAGTGGCCATGGAGGTCACATAGCCCATCCAAAACCACACGGACTCGAGAGCTCAGAGCTGTGCGCTTCTACACGGACTTATACCCAATAGCAGCATATCAAAATATTAAGAGAAATTTGTCAATATTATAAGTGTACATTTTGTAAAATTGGGAATTATCACTACCTTGTAAAATAGTATATTTGTATCATTAGTCTGTCATTTCTGTTACTTGAATCCtagattgttatttttttcatcatgCTTTTGCACTTGAAAATGCAAGCAAGACAAGTGCATCAGTTCATGTTGGGATCATGAGCATGAATATAGGTCCTGCGTCACttgttttaactatttattttgcaatgtttacatttttgtatctCGTACAAATAAATCCAATTTTGTGACCACAAAATGCAGACATAGCTAGTA
>TCONS_00074294
TAACTTTTTCGTATTCTTGCTGAGACCAGCTACGTCAACTAACTGTGGAATTTTTGGTGCTTGTATTGGGTGACAAATCTTTATTGTTCTGGCACAAATGGTGTAACCCTTTCACAAACTCCAGTTGGCCCAATTCGTCATTGAAAAATTAGCTTTGctcactctctttttttttttatggtttgttttttttaggagCACCATCTCCAGAGGGCCATCTCTGCCCAGCAGGTGTTCAGGGAAAAGAAGGAGAGCATGGTCATCCCTGTGCCGGAGGCTGAGAGTAACATCACCTATTACGACCGTCTGTATAAAGGAGAATTTCGCATCCCCAAACAGCTCATCCACATCCAGCCTCTTGGTTTGGATAACGAGCTACCCGACTATGACATGGACTCAGAGGACGAGACTTTACTAAACAGACTCAACCGTAAGATGGAGCTAAAACCTGTGCAGTTTGAGACCATGATGGACCGGTTGGAGAAAGCCAGTACCAACCAGTTGGTCACTCTTCAAGAGGCCAAGCTGCTGCTAAATGAAGATGACTACCTGTTGAAGTCTGTGTATGACTACTGGGTGAGGAAGAGGAAGAACTGCCGGGGGCCGTCTCTTATCCCACAAATCAAGCAGGAGAAGAGGGATGGTTCCACCAACAGTGATGCTTACGTGGCCTTCAGGCGTCGCACAGAGAAGATGCAGACTAGAAAG

Function

symbol description
epc2 Predicted to contribute to histone acetyltransferase activity. Acts upstream of or within primitive erythrocyte differentiation. Predicted to be located in nucleus. Predicted to be part of Piccolo NuA4 histone acetyltransferase complex. Orthologous to human EPC2 (enhancer of polycomb homolog 2).

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0060319 primitive erythrocyte differentiation biological_process
GO:0035267 NuA4 histone acetyltransferase complex cellular_component
GO:0005634 nucleus cellular_component
GO:0032777 Piccolo NuA4 histone acetyltransferase complex cellular_component
GO:0004402 histone acetyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-802 Predicted to contribute to histone acetyltransferase activity. Acts upstream of or within primitive erythrocyte differentiation. Predicted to be located in nucleus. Predicted to be part of Piccolo NuA4 histone acetyltransferase complex. Orthologous to human EPC2 (enhancer of polycomb homolog 2).

Ensembl:

ensembl_id ENSDARG00000007485

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074293 False 2916 mRNA 0.51 14 25347814 25366541
TCONS_00074294 True 708 processed_transcript 0.47 3 25358918 25364581

Neighbor

gene id symbol gene type direction distance location
XLOC_037845 med4 coding downstream 19287 25320680 ~ 25328527 (-)
XLOC_037843 htr2aa coding downstream 92324 25198249 ~ 25255490 (-)
XLOC_037844 BX530034.1 coding downstream 125608 25218834 ~ 25222206 (-)
XLOC_037842 esd coding downstream 166117 25171662 ~ 25181697 (-)
XLOC_037841 rubcnl coding downstream 253633 25091633 ~ 25094181 (-)
XLOC_037847 acvr2aa coding upstream 14217 25380758 ~ 25444091 (-)
XLOC_037848 NA coding upstream 160130 25526671 ~ 25530527 (-)
XLOC_037849 arhgap15 coding upstream 558412 25924953 ~ 25993849 (-)
XLOC_037850 NA coding upstream 757071 26123612 ~ 26127381 (-)
XLOC_037851 CR932998.1 coding upstream 861908 26228449 ~ 26228563 (-)
XLOC_037838 NA non-coding downstream 445241 24561034 ~ 24902573 (-)
XLOC_037837 BX571803.1 non-coding downstream 799818 24547879 ~ 24547996 (-)
XLOC_037836 BX571803.3 non-coding downstream 953432 24390887 ~ 24394382 (-)
XLOC_037835 CR538727.1 non-coding downstream 1012535 24335163 ~ 24335279 (-)
XLOC_037852 BX942825.1 non-coding upstream 1044441 26410982 ~ 26429616 (-)
XLOC_037853 BX942825.2 non-coding upstream 1068532 26435073 ~ 26435187 (-)

Expression


Co-expression Network