G2024949


Basic Information

Item Value
gene id G2024949
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 35396074 ~ 35399967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2316001
GGACACACTGTAAGTGAACACATGCCCTTTAATACCACAGTCTAATTATTAAAACAGTTTCAATAATATACATTTTGTACCTTAAGTATACCCTTTTGAAATGTGTTTAATCCATATGTACACAACATAATGCTTGTAAATTGGAAATTGTTTTCATTATTTTTGTTTCGTAGTGAGTGAGAGGACTtttctattattttttattaagaCTGTCGAGGGCTCAGTAAAAACCAGAGTCCTGATAACAATTTAATATACAAACAACTGTACAACTAACTGCCCTCAGGTCTCTGGACTTCACACCACACAGAGAAGTTGTAGGACTCCTTGTTCATTTTGGTCTACCAACTTACTGACCACAAATTACTAAAATAAAATGGtacactctcagaaaaaaagAGTGCTATGTGGCACCATGTGTCCCTGTAGGGGAACCCTCTGAAAAAaggttccagatagaaccattTAATATCGGAGAGCTATTTCTGGTTCTATTACAGGTTCTATTTGGAATCCAGGTTCTATTTGGTTCTATTTGGAACCCAAAACGGTTCGATCTGGAGCCAACTTTCAGGGGGTTCTCCTACAGGGACAAATGGTGCTGCACAGCACTCCTTTTTTCTGAGAGTATGTGTgaaaacatacaatatgttagAGGAGATGGCCCAGTAATGTAATGAGGTATCTGTGAGAACCTGCCACCTGTAAGAGGTATGGTTGAGTTGCTTTACTCTTGTGTCAACAGGGAAGTGAACTGATGAAGGTGAGCTAAATGCTGCCACATACTGTAACTATTCAGAACCATTGAGAACTGAGCTGGTTCCCTTCAGATGTAAAGTTGAATCTAGAGATACCAGAGGACATAAAGTAGGGAGGGAATGATTGTTTGGTCTGGTGCGGTGCGGTCCTGTGAGCCATGGGGGTAACGTTAGGAGGGTGCTCTGTACAGAAGggtctgggaatgtgatgacgcAGTGGGGGGCACAACCCTTGTCTCTGCTGGCATTGCTGAGGAGCTGGGAGTGCATGGGAGCCCGGGGGACCCGCTGGGCTCTGAAGCCCCACATCCCTCAGCAACATGAAAGGCCTGGTTGGCCATTCCCTTTGAGGCGACTGGATACAAGGGCCCAGGCCAGTAGCAGGTCAGAACAAAGAGGAGCCTGATTGGGAGGGAGGCCCCCCAGGAGGTCTGTGCTGCCTTCTGGACTTCTTGGAGCTAAACTAACTAACCCTGACCATCTTTAAAAACTGAAGACTGAAGAAGTCCTGGGGCTTGTTTAATCAGTGGACATCCACAGAGAGGACACTGGACACTAGGACCAAGAGGAGAGTTGGTTCGTGTCAAATTAGACTCCCATCCCATTTAAATTAAGATTTTTGTGATGTTTAGTGAAACACCCACCATAGGAGGTTTCAAAACAAACTCATTAACAAGCCGGTGCTGAACCAAGATCAGAATGGGCCTCTTTTTGATCCATTATTTTGGAATGGAtgaaacacagttacacagaTATAAAGTATGACAACTTTATACTCTTTCtttcttgtttctctctttgaTCCACAAATGTAGAGAATCAAACCATGGAATCACAGCAGGATAGAGTAAGTGCCTCCCACTCTTTTTCTCTGTAAACAATGCTCTGATGCTCAGCTTACAGTTCATTTTAGGTTATGCTGCTGCAGACATGTGAAGAGTGATTGAAATAATCCTGCCTTAGAAATGAAATGACAGACAGTCAGCAAGACAAACATCAGGGGCGTCCATGATTGAAGTATTGAATTGAATTGTTGATGTATTGAAGTATTCTTTCAATTGTCAGACTATTTGTACTGTGTTTGTTTGTATAAAATAGTTTTGAATAATCATAGTGATTTCTGTGTCAAATAAGCAATTATGGAAAAAATGAATTTTAAACTTTGTACAATAATCAAATAGGCAACTTAGCTTTATCACCGAAGTTTGCTATTACTTACATTGGGCTCTCTCAACATATTAATATGTGCTAATTACTATAAACACAATGAGATAACGTCTGGGTTGATTTGGCGCTGGTCATCAGGACGTATACTAAGAACTTTTTGGGGATGGCGGAAGTTTTGTAGATGATGTGTTATAAGTGCAAACAAAGTTATCAAGCATTTAGAGTACATCTCATCACAATCATGGAGATACACTGATCTACCTCAGTTCACATGTTCCTTGTCAAGTTAGGAACATTCTGGCATTCCACAACCAGCAACACATTCAGAGCCTTCATATACAATTTCATTCAGATTTTCTCACTTCACATTGCAGATCATTTTACCTTTTGACTTTTAACTTTTTAATAAATATATGTACTCTCACATTGTTAATCTTATTTGATTTAAGATATGTTTGACAGATAATTGTGACAAAGCCAATGCACTTTATGCATGCTACAAATGTTTCCTCTGAAAGACGTAGAAATAGCCAGGTTCCCTTGCAGCCCCGTTTAAACAATGAGACCTTCTCCAGCTCTGAATGCATTACCAGCCAGACTGCTGCTTTAGCCACGTAGCCTCCAGACATAATAGTGTTTCTATAGCCACtgccaagtctctctctctctctctctctctctctctgtatctctctgtatctctctctctctctgtctctttctctctctgtctctctctctctgtctctctctctctctctctatttctctctttctctctctctctctctgtctctctctgtatctctctctctctctctctgtctctttctctctctgtctctctctctgtctctctctctctctctctctctatttctctctttctctctctctcgctctgtctatctcgctttctctctctgtctctctttctctctttgtctctgtctctctctctgtctctctctttctcattctctcaagCTTTCAAACCTAATGACTTTGAATACAACGTTCATACATCCTTCATATAGGAGGGGGAAAAATACAACAATCCTATGAATAATTGTTTACACCATGTTGtgacagaacagcaaaaaaacagagaaaaaagTTGTACTTTATAAACAACAATGAAAATAAGAAAGACAATCAATCGGACCTCCCTTGGCTGCGAGGCCTGGTTGCTGGCTATAAGAGCAATGTGGGCTGGATGGCTGtcacttcctcctcttcctctctGCCAGGCCTCCCTAAATAGCACCTGTCTTGTCCCCACTCAGCTGCACTGGACGGCGCACACAACACATGGGCCTCACACATACACGTACGGGACTGGACGACACACCGCCATGCGCTGCACTGAGGGCAAGGGGGCCGTGCTCCTCACTGAGGTCAGGACACCTCTTCACAAGGGGTCAGAGAGCCTTACAACTGGAGGAAAAAGAGATTGGTCACGGTGCTTAAATGGTTCAAGAGATGGAGCTGCTGTTTCAGTCTTTCTGTTCATCATCATAGTCCTATATTTCTTTGGGTGTTATTAGTAAACAGAATCAAATccttttgtttttttctttccttttttgTGTTTATACTACATTCCCCTTAGAGCACTGAGTTCCTCAGAGCTGGCAACGTTATCAGGCGTCTGCTAATACTTAGGTGTTTCTTGCTGGGTTGGTTTTTGTGGTGTGAGGTGGAGGGATATTAGGGTTTGggtttgttctgttctgtccagtaGGGGGGTGAGGAGCCCCTCGTGgctagtccctctcctctcctaaagTCTCTCTAGTCCAGGGGCTCCTGTTTTATCCTGATGGGGGTGTTCATGGACATACTCCGCCGGTCCTCACGGCACAGCACGTACTCGCTGAACTGGGAGGAGTCCACCCCGCCGCCGCAGGACGCTGCCACGCTGAAACCCTTCTGGAACAGACGCTCT

Function

NR:

description
PREDICTED: BTB/POZ domain-containing protein kctd15-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2316001 True 3873 TUCP 0.43 2 35396074 35399967

Neighbor

gene id symbol gene type direction distance location
pepd LOC106562343 coding downstream 346388 35038585 ~ 35049686 (-)
LOC110506712 LOC106562346 coding downstream 490549 34899785 ~ 34905525 (-)
LOC110506710 LOC106562348 coding downstream 516957 34866931 ~ 34879117 (-)
LOC118944477 NA coding downstream 609661 34778714 ~ 34786413 (-)
LOC110506695 LOC106562360 coding downstream 795532 34585124 ~ 34600542 (-)
LOC110506721 LOC106562390 coding upstream 1534 35401501 ~ 35548790 (-)
LOC110506723 LOC106562376 coding upstream 162448 35562415 ~ 35607286 (-)
LOC110506725 LOC106562378 coding upstream 240907 35640874 ~ 35680665 (-)
sdr42e1 LOC106562336 coding upstream 281115 35681082 ~ 35684650 (-)
LOC110506732 brd7 coding upstream 413036 35813003 ~ 35820892 (-)
G2024809 NA non-coding downstream 305000 35090849 ~ 35091074 (-)
G2024801 NA non-coding downstream 323154 35072542 ~ 35072920 (-)
G2024800 NA non-coding downstream 324427 35071223 ~ 35071647 (-)
G2024794 NA non-coding downstream 332745 35063095 ~ 35063329 (-)
G2024792 NA non-coding downstream 334942 35060686 ~ 35061132 (-)
G2025008 NA non-coding upstream 6179 35406146 ~ 35406676 (-)
G2025079 NA non-coding upstream 136967 35536934 ~ 35537147 (-)
G2025080 NA non-coding upstream 137272 35537239 ~ 35537581 (-)
G2025086 NA non-coding upstream 159857 35559824 ~ 35560047 (-)
G2024673 NA other downstream 467693 34876422 ~ 34928381 (-)
LOC110506691 LOC106562361 other downstream 893588 34499589 ~ 34523950 (-)
LOC100136595 calc1 other downstream 1591750 33800216 ~ 33815643 (-)
G2022042 LOC106562320 other downstream 2517303 32875255 ~ 32878771 (-)
G2021975 NA other downstream 2561593 32831627 ~ 32834481 (-)
G2025061 NA other upstream 95820 35495787 ~ 35497803 (-)
G2025757 NA other upstream 943189 36343156 ~ 36343434 (-)
LOC110506740 LOC106562403 other upstream 1434766 36793286 ~ 36913660 (-)
G2026993 NA other upstream 2020444 37420411 ~ 37421037 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01076236_00000844_00001609 NA coding CI01076236 null 844 ~ 2568 (+)