G2025061


Basic Information

Item Value
gene id G2025061
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 35495787 ~ 35497803 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2316121
cagctacagccctcccaccagcatggtactgtctaacttagtgcccagccccagccctcctaccagcatggtactgtgttactttgtgcccagccccagccctcccaccagcatggtactgtgttacttagtgcccagccacagccctcctaccagcatggtactgtgttacttagtgcccagccacagccctcccaccagcatggtactgtgttacttagtgctcagccccagccctcctaccagcatggtactgtgttacttagtgcccagccacagccctcctaccagcatggtactgtgttacttagtgcccagccacagccctcctatcagcatggtactgtgttaattagtgcccagccctcctaccagcatggtactgtgttacttagtgcccaaacccagccctcctaccagcatggtgctgggttacttagtgcccagccacagccctcctaccagcatggtactgtgttacttagtgcccagccacagccctcctatcagcatggtactgtgtttattagtgcccagccctcctaccagcatggtactgtgttacttagtgtcCAGCCCTCCTacaagcatggtactgtgttacttagtgcccagccacagccctcctacagcatggtactgtgttacttagtgcccagccccagccctaatACCAGCacggtactgtgttacttagtgcccagccacagccctcctaccagcatggtactgtgttacttagtgcccaaacccagccttcctaccagcatggtactgtgttacttagtgcccaaatccagccctcctaccagcatggtactgtgttacttagtgcccagccacagccctcccaccagcctggtactgtgttacttagtgcccagccccagccctcctaccagcatggtactgtgttacttagtgcccagccttCCTACCAGCAtagtactgtgttacttagtgcccagccacagccttcctaccagcatggtactgtgttacttagtgcccagccctcctaccagcatggtactgtgtaacTTAGTGCCCaaaacccagccctcctaccagcatggtactgtgttacttagtgcccaaccccagccctcctaccagcatggtactgtgttacttagtgcccagccccagccctcctaccagcatggtactgtgttacttcgTTCCCAGCCACAGCGCTCCtcccagcatggtactgtgttacttagtgcccagccc

Function

NR:

description
uncharacterized protein LOC110497064

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2316121 True 1236 TUCP 0.55 2 35495787 35497803

Neighbor

gene id symbol gene type direction distance location
pepd LOC106562343 coding downstream 446101 35038585 ~ 35049686 (-)
LOC110506712 LOC106562346 coding downstream 590262 34899785 ~ 34905525 (-)
LOC110506710 LOC106562348 coding downstream 616670 34866931 ~ 34879117 (-)
LOC118944477 NA coding downstream 709374 34778714 ~ 34786413 (-)
LOC110506695 LOC106562360 coding downstream 895245 34585124 ~ 34600542 (-)
LOC110506723 LOC106562376 coding upstream 64612 35562415 ~ 35607286 (-)
LOC110506725 LOC106562378 coding upstream 143071 35640874 ~ 35680665 (-)
sdr42e1 LOC106562336 coding upstream 183279 35681082 ~ 35684650 (-)
LOC110506732 brd7 coding upstream 315200 35813003 ~ 35820892 (-)
LOC110506734 LOC106562388 coding upstream 480288 35978091 ~ 35980950 (-)
G2025008 NA non-coding downstream 89111 35406146 ~ 35406676 (-)
LOC110506721 LOC106562390 non-coding downstream 92028 35401501 ~ 35548790 (-)
G2024809 NA non-coding downstream 404713 35090849 ~ 35091074 (-)
G2024801 NA non-coding downstream 422867 35072542 ~ 35072920 (-)
G2024800 NA non-coding downstream 424140 35071223 ~ 35071647 (-)
G2025079 NA non-coding upstream 39131 35536934 ~ 35537147 (-)
G2025080 NA non-coding upstream 39436 35537239 ~ 35537581 (-)
G2025086 NA non-coding upstream 62021 35559824 ~ 35560047 (-)
G2025095 NA non-coding upstream 110378 35608181 ~ 35609198 (-)
G2025159 NA non-coding upstream 235085 35732888 ~ 35739367 (-)
G2024949 NA other downstream 95820 35396074 ~ 35399967 (-)
G2024673 NA other downstream 567406 34876422 ~ 34928381 (-)
LOC110506691 LOC106562361 other downstream 993301 34499589 ~ 34523950 (-)
LOC100136595 calc1 other downstream 1691463 33800216 ~ 33815643 (-)
G2022042 LOC106562320 other downstream 2617016 32875255 ~ 32878771 (-)
G2025757 NA other upstream 845353 36343156 ~ 36343434 (-)
LOC110506740 LOC106562403 other upstream 1336930 36793286 ~ 36913660 (-)
G2026993 NA other upstream 1922608 37420411 ~ 37421037 (-)
G2027052 NA other upstream 1993049 37490852 ~ 37491416 (-)

Expression


Co-expression Network