dhx36 (dhx36)


Basic Information

Item Value
gene id dhx36
gene name dhx36
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41521446 ~ 41571922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965019.1
TATTTTGTAGCATTTCGTGCATTCAGAGTATTTCGGGGTCTCGCCGGGTTGCGCGAACCAAGCCTATCATGAGAGAAACGTCATCATCCTTCGACTATTTCATTGTTGTGTAAACTATGCGACAGGATATATATCTATACACAAGACTCACATCcttgcaaaaaaaatatatacagatgTTCTCTTGATATCAGCGGAAATGCTATTTATTTCTTTCACATTCAACTACTTAGGTATTTCGAACATCATCTGAAATATGTACACGCTTCGAGATATACAATTATTAATTTAGCACATCTACTTGATCCACGGGCCGGCTAACGtttactagctaacgttagctagcaaatcCCAAGGCAAAGGTTTCGAATAGTGCAGCaagtttagctagctggctagtccCAATTTGTAAGTCTACAGACAGTGTCTTGCACTGCTATCTTGCCATAGCTGTGTTTCTGTGGTTTTGAAGGCGTTATGAGTTATGGAGGTTATGGGGGCAGAGGCGGCCGACGAGGTGGCCGAAGAGGAGGTCGAGGATTCGGACGGGATGGGAGCCGGGAGAGGTGGGACCGCCTAGCTGGGTCGAGTGGTGGTGGACACCCGCGGAGCACCGAAACGGAGTCGAGGGAGGACCGGGGAGAacgaggagggagaggtgggggaccAAACCGTCCACCCCCGCATCTAAAGGGCCGGGAGATCGGACTGTGGTACGCCAAATGGGGAGGCTTGAAGAGGAAAGAAAATGAGAGAAAATCGCGGGCAGTGGTTCAGATGGATGAGTCCAGGGAACAGCATATCACTAATCTGCTGAACACTGTCCAGAGAGGACCGACATGCCCAGCCAGGGAGGCCCACCCCTCCACATCTGAGCACTGGCGTTCAACCCCGTCAGCACCGGTCAGAGGCGGCCACTGTTACTTTGATGGTGATGAGCCCTCTCAGGATGTCCTGAAAATGGATCTCAAACAAGAGAAGAAGGAGGTTGAGGAGAGGCCAGTACAGAACACTCCACTCACATCACAACGTTACTTCCCACAGGATGTCCTTAAAGCTGAACCccaagaagagagggaggagaaggagaggagagggaaggataaAGACCTGGAGTATTTGTTTCAGGAGGTGGTCAGGGAGAATGCCCTGGACCAGCAGTTAAAGAGAGATCTAGAGAGGAAGAAGGCGGACTCTAAATACCTAGACATGCTGaaattcaGGGAAAAGCTTCCATCCTTTGGAAAAAAAGAGGAGTTGGTGGAGTTGATCAGGTCCAGCCAGGTGCTGGTGGTCAGTGGAGAGACGGGGTGTGGTAAGACCACCCAGGTGACCCAGTTTATCCTGGATGACTACATAGAGAGGGGCATGGGTTCAGTCTGCAGGGTGGTCTGCACCCAGCCACGTCGCATCAGTGCCATATCtGTAGCAGAGCGGGTGGCTGCGGAGAGGGCTGAGAGTGTAGGGGACGGGAACTCATGTGGTTATCAGATCCGCCTGCAGAGTCGGTTACCACGGAAACAGGGCTCGGTGCTGTATTGTACAACGGGTATTATTCTACAGTGGCTTCGCTCTTCCCCtctGTTGTCCACCATCAGCCACCTGGTTTTGGATGAAATTCACGAGAGGAACCTTCACTCTGATGTTCTACTCATCATTGTTAAAGACCTGCTCCGAGTCCGACAGGACCTCAAGGTCATCCTCATGAGTGCCACGCTCAACGCTGAGAAGTTCTCCAAATACTTTAATAACTGTCCTATGATCCACATCCCGGGGATGACCTTCCCGGTACAAGAGTTCCtaatggaggatgtgttggagaTGATTAGGTACCGTCCCCAGAAGAAGGAGCAGAGGCCCAGGTGGAAGAGAGGTTTCATGCAGGGTCAGAATTCCAGACCAGAGAAGGACCAGAAAGAGGCCGAGTACAAGGAGAGCTGGCCCTGCTACGCCCGCACACTACGAGACAAGTACTCTGACAGAACCATAGATGTGTTGGAGATGATGGACGATGATGATAAGATTGACCTTGATCTCATCGTGCAGCTGATCAGACATATCGTGCTAAGCCAGGAAGAAGGAGCCATCTTGGTGTTCCTGCCAGGTTGGGACAACATCAGTGGCCTCAACGACCTCCTCATGGCTCAGCAGATGTTCAAATCAGATCGGTTTGTGATCATTCCTCTGCACTCCCTGATGCCTACTGTCACCCAGACCTCGGTGTTCAAAAGGCCTCCTCCAGGAGTCAGGAAGATTGTCATTGCCACCAATATCGCTGAGACCAGtattACCATAGATGATGTGGTGTTTGTGATAGATGGGGGAAAGATTAAGGAGACTCACTTTGACACTCAGAACAACATCAGCACTATGACTGCAGAGTGGGTCAGCCTGGCCAATGCCAAACAGAGAAGAGGACGCGCTGGCAGGGTGTGTCCAGGGAAGTGTTATCACCTGTATAATGGCCTGAGGGCCAGTCTTCTGGATGCCTACCAGCTACCTGAGATCATGCGCACACCACTGGAGGAACTGTGTCTGCAGATCAAGATCCTCAAGCTGGGTCCAATAGCAGAGTTCCTGAGGAAAGCTCTGGACCCTCCCACAGAGGAGGCTGTCACTCTGGCCATCACACACCTGATGGACCTCAATGCTCTGGACCGCTCAGAGGCTCTGACCCCGTTAGGGTTCCACCTGGCCAGGCTGCCTGTAGAGCCTCACATCGGGAAGCTGATCCTGTTTGGAGCTCTGCTGGGCTGTCTGGACCCTGTCCTCACTATCGCTGCCTCTCTCAGCTTCAAGGACCCCTTCTTCATACCAATGggtaagGAGAAGATGGCAGACTTTAGGAGAAGAACTCTGTCCAGAGAATCAAAGAGTGACCACCTCACCATCATCTATGCCTTCACAGGCTGGGAGGAAGCTAAGCGACGCGGCTACAAGTTTGAACGAGAGTTCTGCTGGGACAACTTCCTGTCAGCCAATACACTCCAGaTGCTGCACAACATGAAGGGTCAGTTTGCTGAGCACCTGCTGGGGGCTGGcttcaccagcagcaagaaccCAAAAGACCCTGAATCTAACACAAACTCAGataATGAGAAGCTGATCAAGGCAGTGATAGTGGCAGGTCTCTACCCCAAAGTGGCCATGATCAAACCCAGTGGCAGCAAGAAGAGACCgGTGAGGGTGTATACCAAAACCGATGGGAAGGTGTGTATTCACCCCAAGTCAGTGAATGCTGAGGAGACCCAGTTTAACTACACATGGCTCATCTATCACCTCAAGATGAGGACCAGCAgtATCTTCCTGTACGACTGTACGGAGGTGTCTCCGTTCTCCCTGCTGTTCTTTGGAGGTGACGTCACCATACAGATGGATCAGGACCAGGAGACCATCGCTGTGGACGACTGGATCGTGTTCCAGTCCCCCGCACGCATCGCTCACCTCGTCAAgAATCTGAAGAAGGAGCTGGACTCTCTATTGGAAGAGAAGATCCGAAGCCCCGCCCCTGTGGACTGGAGCAACCGCCAATCCAAAGACTGTGCCGTCATCACAGCCATCATAGACCTCATCACCACCCAGGAGAGACCCGACGTTAACGCGAGGAACACTGAGCCTAGAGGACGCCGCCAGTATCACAACAACGATGATGGTGGTGACGAGTACGAGAACTGCTGCATCTCTTCTCAACCCAGAGAAAAGCTCAGGccatagagatggaaagaggtctccactttgtatctgtgccataatggcgctgcccatgctctcTCAGTTTGAGTTAAGTGTCAAGCTAATGTTGGTGATGTACCTCCACTTGCAGAGCTGGAGTCTTAAACTAAATATTGTGTTATTTTGGCGATAAAGCTTAACGCCATTTACCAACTAGGCAAACCAATTTGAAGACCATGCTCTGGTCATTGGCTGATCATTCCCATAGGAAtcccccacccagttgactactttcaaaatggtggaagccctcaatgtccATGCTAAATTGTTTCCAAGTAGAGATCTCTATACATCTCAATGTCTTAGGCACATTTTCTATTGGATACGAGTCCAGTCAGGATGGTATGTGAAGAAAAAGTCCCCGAACACCAACTGTTTGAATTTAATTCTATAAGCCTACTGGAAAAGGCTGAGCatgtattttttcatttgttaaaaacAATTATGTGAAACTAAGTTGTATGGAATGCTGTTGTGTTGATATTGCTTGACATTCTCATGTTGTCACTTGGCTAACTTGGTTAACTTGCCATTGTTTTCTTTTCAGTTTTTTGTTCAAATATTAGAATCTTCTCCCTGAAGCTGAACCAATAAAGCTGCCCTTATTGCAGGGTTACGTTA

Function

symbol description
dhx36 Predicted to enable DNA helicase activity and G-quadruplex RNA binding activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human DHX36 (DEAH-box helicase 36).

NR:

description
ATP-dependent RNA helicase DHX36

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K14442 DHX36, RHAU; ATP-dependent RNA helicase DHX36

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965019.1 True 4356 mRNA 0.50 25 41521446 41571922

Neighbor

gene id symbol gene type direction distance location
LOC110507232 LOC106593204 coding upstream 14835 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 317751 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 335982 41180486 ~ 41185464 (+)
LOC110507231 LOC106581468 coding upstream 352962 41163243 ~ 41168484 (+)
LOC110508044 LOC106581474 coding upstream 524878 40992078 ~ 40996568 (+)
LOC118944685 NA coding downstream 206999 41778921 ~ 41781836 (+)
LOC110507284 sucnr1 coding downstream 659436 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 826767 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 912934 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 919538 42491460 ~ 42492431 (+)
G2083532 NA non-coding upstream 609 41520596 ~ 41520837 (+)
G2083531 NA non-coding upstream 1996 41519175 ~ 41519450 (+)
G2083523 NA non-coding upstream 7574 41513460 ~ 41513872 (+)
G2083524 NA non-coding upstream 8570 41512660 ~ 41512876 (+)
G2083518 NA non-coding upstream 28297 41492861 ~ 41493149 (+)
G2083560 NA non-coding downstream 1540 41573462 ~ 41575975 (+)
G2083736 NA non-coding downstream 171757 41743679 ~ 41743926 (+)
G2083737 NA non-coding downstream 173443 41745365 ~ 41745573 (+)
G2083743 NA non-coding downstream 179062 41750984 ~ 41751228 (+)
G2083750 NA non-coding downstream 210545 41782467 ~ 41782709 (+)
G2083239 NA other upstream 308674 41212204 ~ 41212772 (+)
G2083005 NA other upstream 536592 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 675407 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1563695 39957215 ~ 39957751 (+)
G2083851 NA other downstream 399337 41971259 ~ 42112036 (+)
G2084156 NA other downstream 688601 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1491366 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1960348 43532270 ~ 43532578 (+)
G2085122 NA other downstream 2160473 43732395 ~ 43733894 (+)

Expression


Co-expression Network