LOC110507284 (sucnr1)


Basic Information

Item Value
gene id LOC110507284
gene name sucnr1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42231358 ~ 42242002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587167.2
CCAGTATTGGTTAGTTTGCAGCCTGTTTGTAGTCAAAACAATAGCTTCATTCACTGCCTACAAAAAAGACTCCTACCACACAAGACAGAACAATGgtGTATAACTGTACAATGCTAGATGAATTCCTGTTGCAGTACTACCTGACTCCCGCCTATGCCCTGGAGTTTGCCCTGGGTTTCCCCAGCAACCTGCTGGTGGTCCTGGGTTACGTGTTCTGCCTGCCAGAGTGGAAGAGCACCAATGTTTACCTGTTCAACCTCGCTGTCTCTGATCTCATCTTTCTGTGCACGCTGCCACACCTCTCCTACCTGTACGCCAACGCCAAATCAGAATACAACGGCTTCGGCTGCATCATCAACCGCTATATCCTCCATACCAACCTCTACTCCTCCATCCTTTTCATGGTGTGGGTCAGCATGGACCGCTTCCTGCTCGTACGACACCCGTCACGACTTCACTTCTTGTTGACCAAGAAGGCGGCCCTCTGCTTGTCTCTCATGACCTGGGTGGCAGTTAACATGCAGGTGGCCCCCCTAATATTCTACATCGTCCAGGACATGCAGAAAGGGAACTGGAGCTTATGTAAGGACTTTGGGAGCCTGGGGGTTATGGAGAACttgctgggatacagcctgggcCTGACGGTGActggctacctgctgcctctgCTGGGGCTTGGCTTCTTCAGCTTCCACATCAACCGGCTTCTCCGTGTCCAGGCGGAAGTGATTCAGGGCACGGGGACATCGTTCCGCAAGCCCGTACGTGTGGTCTCTGCTGTAGCGACCATGTTTCTGGTACTGTATCTGCCCTATCATTTGATGAGGAATGTGAGGATAGCGTCGCGGCATCCCTGGGCAGGGCTGTCTGACTGCCACAAGATATATATACAGAGTGCATACATCCTGACCAGGCCGGTGGCATTCGTCCATAGTGTTATTAACCCTGTGTTCTACTTCTTCATGGGAGACAAGTTCAGAGAGCTCCTATTGGCCAAGATCAGAGTCCTGGTGAGACAGCTAGAACAGAGGACAGGGACCTCAATGTGAGATCCTGTtgaacactcactcacacacacaaacaaacacacacagtgtccGGGAAAATATCATGGTATGTTTGAAATATTATTCAAGTAGGCATATTTAACCAATGTTGTGATGTCCCGATCTGCAGGGCAGGGGTGGAACCAGCCACGCTAAGCATTTTTATGTCTACTATATAAGACCTGAGCATTTCTTGTATTATTGGGCTCACAACAAGTCACCTACGATTGGTCCTTGAC

Function

symbol description
sucnr1 Predicted to enable signaling receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within several processes, including macrophage activation involved in immune response; regulation of angiotensin metabolic process; and renin secretion into blood stream. Located in extracellular exosome.

NR:

description
succinate receptor 1

GO: NA

KEGG:

id description
K10042 SUCNR1, GPR91; succinate receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587167.2 True 1285 mRNA 0.50 2 42231358 42242002

Neighbor

gene id symbol gene type direction distance location
LOC118944685 NA coding upstream 449522 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 659436 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 724747 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 1027663 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 1045894 41180486 ~ 41185464 (+)
LOC110507235 LOC106581497 coding downstream 156687 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 242854 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 249458 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 260540 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 268817 42510819 ~ 42515563 (+)
G2084128 NA non-coding upstream 14962 42216064 ~ 42216396 (+)
G2084111 NA non-coding upstream 26017 42205141 ~ 42205341 (+)
G2083947 NA non-coding upstream 53950 42176969 ~ 42177408 (+)
G2083925 NA non-coding upstream 105207 42125930 ~ 42126151 (+)
G2083923 NA non-coding upstream 113244 42117834 ~ 42118114 (+)
G2084156 NA non-coding downstream 18521 42260523 ~ 42261637 (+)
G2084250 NA non-coding downstream 79497 42321499 ~ 42321798 (+)
G2084256 NA non-coding downstream 98674 42340676 ~ 42340890 (+)
G2084264 NA non-coding downstream 113488 42355490 ~ 42355715 (+)
G2084265 NA non-coding downstream 114509 42356511 ~ 42356732 (+)
G2083851 NA other upstream 119322 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1018586 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1246504 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 1385319 40840706 ~ 40847141 (+)
G2084659 NA other downstream 821286 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1290268 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1490393 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1876221 44118223 ~ 44119239 (+)

Expression


Co-expression Network