G2074214


Basic Information

Item Value
gene id G2074214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 31952063 ~ 31958113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2371696
atattacatacaaccccttcaccATGTTAAtgcttaatattacatacaaccccttcaccATGTTAAtgcttaatattacatacaaccccttcactctgttactgcttcactctgttactacttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcactctgttactacttaatattacatacaactccttcactctgttactacttaatattacatacaaccccttcaccctgttactgcttcactctgttactgcttaatattacccacaaccccctcactctgttactacttaatattacataccaccccttcactctgttactgcttcactctgttactgcttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcactctgtaactacttaatattacatacaaccccttcaccctgttactgcttcactctgttactgcttaATATTACCTACAACCCCtcactctgttactacttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcaatctgttactacttaatattatatacaaccccttcactctgttactgcttcactctgttactgcttaatattacatacaatcccttcactctgttactgcttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcaccctgttactacttaatattatatacaaccccttcactctgttactgcttcactctgttactgcttaatattacatacaatcccttcactctgttactgcttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcaccCTGTTACtacttcactctgttactacttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcaccCTGTTACTacttcactctgttactgcttaatattacatacaatcccttcactctgttactgcttaatattacatacaatcccttcactctgttactgcttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcaccCTGTTACTACTTCACCCTGTTACTACTTAATAT
>TU2371697
gttactgcttcactctgttactgcttaATATTACCTACAACCCCCtcactctgttactacttaatattacATACcaccccttcactctgttactacttaatattacatacaaccccttcactctgttactacttaatatcacatacaaccccttcactctgttactacttaatattacatacaaccccttcactctgttactacttaatattacatacaaccccttcactctgttactgcttaatattacatacaaccccttcactc

Function

NR:

description
PREDICTED: stress response protein NST1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2371696 False 1191 lncRNA 0.36 3 31952063 31958113
TU2371697 True 267 lncRNA 0.36 2 31953163 31954788

Neighbor

gene id symbol gene type direction distance location
LOC118944767 NA coding upstream 80356 31870740 ~ 31871707 (+)
LOC110507951 LOC106581346 coding upstream 83763 31853996 ~ 31868448 (+)
efhd1 LOC106581350 coding upstream 181298 31748676 ~ 31770765 (+)
trnag-ucc-233 NA coding upstream 203711 31748281 ~ 31748352 (+)
trnaw-cca-60 NA coding upstream 204850 31747142 ~ 31747213 (+)
LOC110507983 LOC106581345 coding downstream 312093 32270206 ~ 32488659 (+)
LOC110507985 LOC106613152 coding downstream 570460 32528573 ~ 32591906 (+)
LOC110507986 NA coding downstream 985694 32943807 ~ 32963656 (+)
vwa7 LOC106581332 coding downstream 1121681 33079794 ~ 33093823 (+)
LOC110507993 LOC106581333 coding downstream 1147070 33105183 ~ 33111804 (+)
G2074213 NA non-coding upstream 6317 31945330 ~ 31945746 (+)
G2074199 NA non-coding upstream 32936 31918900 ~ 31919127 (+)
G2074192 NA non-coding upstream 37023 31914694 ~ 31915040 (+)
G2074188 NA non-coding upstream 38619 31906482 ~ 31913444 (+)
G2074171 NA non-coding upstream 68332 31883512 ~ 31883731 (+)
G2074217 NA non-coding downstream 639 31958752 ~ 31959031 (+)
G2074223 NA non-coding downstream 5012 31963125 ~ 31963433 (+)
G2074312 NA non-coding downstream 76018 32034131 ~ 32034693 (+)
G2074313 NA non-coding downstream 76993 32035106 ~ 32035363 (+)
G2074319 NA non-coding downstream 82244 32040357 ~ 32040615 (+)
G2072515 NA other upstream 1680066 30270111 ~ 30271997 (+)
G2072178 NA other upstream 1937239 30011465 ~ 30014824 (+)
G2071807 NA other upstream 2311764 29638879 ~ 29640299 (+)
LOC110507925 LOC105015878 other upstream 2424703 29398701 ~ 29609924 (+)
LOC110507926 LOC106581290 other upstream 2644931 29301663 ~ 29353272 (+)
G2074226 NA other downstream 7905 31966018 ~ 31974065 (+)
G2074227 NA other downstream 10424 31968537 ~ 31976501 (+)
G2074502 NA other downstream 238700 32196813 ~ 32197204 (+)
G2074577 NA other downstream 353877 32311990 ~ 32312276 (+)

Expression


Co-expression Network