G2075229 (LOC106581331)


Basic Information

Item Value
gene id G2075229
gene name LOC106581331
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 33030717 ~ 33031436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2372814
ATTTCTTTCCAAATCAGGGCAGATGAAGGACAAGAGTTGCCAGGACTATGAGTGTAAGCTATAGCTTACCTTTCTGAGCCTGAATCCATGATACTGCCTTCATAGCCAGAAACTGCCAATCCTCCTGAGCCTCCATCTTGAAACCATAGAGCCATATCAGGGCTAAAACTGTGGCCCACACCTCCTGGTCCACCTGTGCAGGCTTTGGCTTGgacacctcctcctctgtcttcacCAGCACCTCAGCCAATGCTGCCTCTAGGACCCAGGAACCAGAGGCCTTCTGAAGGGAGATCAGCTGGAGGAGAGGGTCCCTCATAGGCTTAGAGGTTGGGGCTGGAGAGTCAAAGTCTATTGGGATTGGACAACATAATTGAAATCGAAATGCTTCCTTAATGTACATTAATACCTCAACCCAAACTCTAATCCTAACCGTTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2372814 True 438 lncRNA 0.49 2 33030717 33031436

Neighbor

gene id symbol gene type direction distance location
LOC110507986 NA coding upstream 67061 32943807 ~ 32963656 (+)
LOC110507985 LOC106613152 coding upstream 438815 32528573 ~ 32591906 (+)
LOC110507983 LOC106581345 coding upstream 542058 32270206 ~ 32488659 (+)
LOC118944767 NA coding upstream 1159010 31870740 ~ 31871707 (+)
LOC110507951 LOC106581346 coding upstream 1162417 31853996 ~ 31868448 (+)
vwa7 LOC106581332 coding downstream 48358 33079794 ~ 33093823 (+)
LOC110507993 LOC106581333 coding downstream 73747 33105183 ~ 33111804 (+)
LOC110507998 LOC106581335 coding downstream 127432 33158868 ~ 33181390 (+)
LOC110507999 LOC100380744 coding downstream 153142 33184578 ~ 33195813 (+)
robo1 robo1 coding downstream 359756 33391192 ~ 33935721 (+)
G2075207 NA non-coding upstream 214 33003805 ~ 33030503 (+)
G2075228 NA non-coding upstream 1411 33021682 ~ 33029306 (+)
G2075210 NA non-coding upstream 46839 32983353 ~ 32983878 (+)
G2075253 NA non-coding upstream 56019 32974474 ~ 32974698 (+)
G2075179 NA non-coding upstream 151922 32878366 ~ 32878795 (+)
G2075261 NA non-coding downstream 63151 33094587 ~ 33094959 (+)
G2075308 NA non-coding downstream 100405 33131841 ~ 33134427 (+)
G2075349 NA non-coding downstream 151118 33182554 ~ 33182857 (+)
G2075355 NA non-coding downstream 176927 33208363 ~ 33208567 (+)
G2075359 NA non-coding downstream 182917 33214353 ~ 33214571 (+)
G2075208 NA other upstream 40489 32988501 ~ 32990228 (+)
G2074973 NA other upstream 406749 32623624 ~ 32623968 (+)
G2074650 NA other upstream 565841 32464238 ~ 32464876 (+)
G2075508 NA other downstream 484805 33516241 ~ 33521004 (+)
G2075687 NA other downstream 786096 33817532 ~ 33817988 (+)
G2075724 NA other downstream 867841 33899277 ~ 33899623 (+)
G2076000 NA other downstream 1470813 34502249 ~ 34502705 (+)

Expression


Co-expression Network