G2075778 (LOC106581381)


Basic Information

Item Value
gene id G2075778
gene name LOC106581381
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 34050426 ~ 34050657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2373403
TGGTAGGCACGGGTGATCTCGTCTAGGTGGGCCTGGAGCATGGGCTGCAGCTCCTCccggggagagggggtgagggtggCCGTGGACTGCTGACCGAAGGACACCGCTGCTGGGGACGAGGCCACTCCACGCATGGGTGGGGTGgggaccctctcttcctcctcctctagctCATCCTCCATTCCCTGGTGGAGGTAGGTCTGCACGGGCATGGGAGGACCCCAGCCATCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2373403 True 232 lncRNA 0.66 1 34050426 34050657

Neighbor

gene id symbol gene type direction distance location
robo1 robo1 coding upstream 114705 33391192 ~ 33935721 (+)
LOC110507999 LOC100380744 coding upstream 854613 33184578 ~ 33195813 (+)
LOC110507998 LOC106581335 coding upstream 869036 33158868 ~ 33181390 (+)
LOC110507993 LOC106581333 coding upstream 938622 33105183 ~ 33111804 (+)
vwa7 LOC106581332 coding upstream 956603 33079794 ~ 33093823 (+)
LOC110507198 NA coding downstream 710961 34761618 ~ 34766144 (+)
LOC110507199 LOC106613190 coding downstream 770964 34821621 ~ 34827171 (+)
LOC110507268 LOC106593235 coding downstream 811638 34862295 ~ 34863448 (+)
LOC110507201 NA coding downstream 813086 34863743 ~ 34864743 (+)
LOC110507203 LOC106581388 coding downstream 827862 34878519 ~ 34879765 (+)
G2075728 NA non-coding upstream 146503 33903647 ~ 33903923 (+)
G2075719 NA non-coding upstream 167100 33883035 ~ 33883326 (+)
G2075710 NA non-coding upstream 180625 33869525 ~ 33869801 (+)
G2075709 NA non-coding upstream 185466 33864552 ~ 33864960 (+)
G2075780 NA non-coding downstream 2739 34053396 ~ 34053669 (+)
G2075821 NA non-coding downstream 84604 34135261 ~ 34137971 (+)
G2075941 NA non-coding downstream 360784 34411441 ~ 34411763 (+)
G2075949 NA non-coding downstream 371101 34421758 ~ 34422197 (+)
G2075976 NA non-coding downstream 412416 34463073 ~ 34463426 (+)
G2075724 NA other upstream 150803 33899277 ~ 33899623 (+)
G2075687 NA other upstream 232438 33817532 ~ 33817988 (+)
G2075508 NA other upstream 529422 33516241 ~ 33521004 (+)
G2075208 NA other upstream 1060198 32988501 ~ 32990228 (+)
G2076000 NA other downstream 451592 34502249 ~ 34502705 (+)
G2076102 NA other downstream 661919 34712576 ~ 34714556 (+)
gucy1a2 LOC106581392 other downstream 964522 35014631 ~ 35111042 (+)
G2077547 NA other downstream 1095487 35146144 ~ 35146669 (+)
LOC110507975 LOC106581363 other downstream 1415333 35465699 ~ 35519109 (+)

Expression


Co-expression Network