gucy1a2 (LOC106581392)


Basic Information

Item Value
gene id gucy1a2
gene name LOC106581392
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35014631 ~ 35111042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965275.1
GCAGAGTGGACAGATATAACTCCACCAGGCAGCGGATCGAGCTGATGTTTGACTGCGCGAGCATCTCTCGGTATCTTCCGATCCTCAGTTCCGAACCTGGACACACCGTTTCCCGCCCACCGGAGAGGAATACAGCCAGCCAACTGCAGGGATGAAAGGATGAGCAGTTCACACAGACAGAGTCAGAAAGCCGTGAAGCCGCAAATGACTTGATAGTAGAGGTGCGCAGCAGGCAAAATACTTCCACCGTGGATTTCAAAGGGAAAACAAAAAGGACAACCGTTAAAACCGTTAGACATGAGATTCAGCTGGTGAACCTAGTCCCTATCTGGACGTCGCGATATTTGTTTGTTCTCTAAATGCTCGCGTGCCGTTAGTGTCGCTCTTAACCGGCGCGCGCGCCTCCCAATCTTTCCCACGCAAGTGAATCTGATGAGTCCCCGTAGCCGCGTGTTGTTTCGTCGCCGCACGCGTACGCGCCCGGACTTCTCGCGCTTAGCAGCAGAAGCATGTCCTCGCGCAAGATCTCGTCGGAGTCGTTCAGCTCGATGGGCTCGGAGTGCCTGGAGAGCCCTGGAGATGATGGCGACTCCTGCCCATTTTCACGCATCTGGAACGGCAAGAGCCCCGTGGAGAAGCTCGCGTGCCCGTTCGAGGACGCACAGGGACCCAAACGGGCGACAAGACGGAAGCGCGTGAACCTGGACTCGCTCGGGGAGAGCTTGAGGAGGTTAACGTCGCCCACGACACAGATGGTTCAACAGTCTTTACAGAGAACCTTAGAGTTCTACAGACAGAAAGAGATCAGgtGCAGAGAGGATGGGAAGGAGGAAAAGAAAAGTGTTACTTTGGAGAAGTGTCCCTTTGTGGATCATTGTGGTTCTGGAGAAGAGGCAGACATCTCTGGAGTACTACAGTACATGGCTACTCTACAGGGTGTGCAGTTCTGTGAGCTGAGGGAGCGTTTTGGGGAGGAGTTCTTCGGTCTGTGTTTCGAGGAGAACGAGCGGGTTCTAAGAGCGGTGGGAGGGAACCTGCAGGACTTCTTCAACGGCTTTGACGCAATCTTAGAACACATCAGAACCTCGACCGGACGCCGTGCCTCCTCAGAGAGCCCCTCCTTTCAATGCAAAGACCCTcacgaggaggagagaggaagaggaagggagagggtggAAGGAAagcttctcctcctccactgcttTAACCCCGCCCCTGTCGTGGGATTGGCTATGCCTGGTCTGATCCGAGCCGTCGCACGCCGAATCTTCCACTCCCAAGTTGTGGTGAAGGAAGCCCCTCCCCTAGCGCCCTTGTCGCCCAATGAGGACGCAGAACACTCAGGAGGAGACTCCACCCCTACACcgaccccctctccttccccgtctgcccccgtctgcctctccttcctcaTCAGAGAAACCTCACCctccccttcctccatccctccctcctctgtcactCTTCCAACAGAGACCCCCAAGCAGACCCTCccgcccctctccctctcccccactgaCCTGCGCATCGGTCCAGCAACATTCTGCAGGGCCTTCCCCTTCCACCTGGTGCTGGGCCCCAGCATGGAGCTGCTGCAGCTAGGGGAAGGTCTGAGGAGGCAGGCACGGATCGAGCCTCACCGGACCCTCTCCTTCAGGGACTGTTTTGAGATCATCTCCCCCAGGATCCAGCCCACCTTCCAGGCCATACTGCTGCGCCTGGCCTCCCCCTTCACCATCCGCACCCGGCCGGACTGCTCCCAGTCAGGCACCAAGGAGAAGGTGATGGAGGTGAAGGGTCAGATGATTCATGTCCCAGAATCCTCTACGCTGATGTTCCTGGGTTCCCCCCGGGTGGACAAGCTGGAGGAGCTGATGGGCAGGGGCCTCTACCTGTCAGACATCCCCATCCACGACGCCACGCGTGATGTCATACTGGTGGGACAGCAGGCCAAGGCACAGGACGGCCTCAAGAACAGGATGGACAAACTCAAgGCCACTCTAGAAAAGACACACCAAGCTctagaagaggagaagaggaggacagtaGACCTTCTCTACTCCATTTTTCCTGGTGACGTGGCCCAGAAGCTGTGGCAGGGGGAGTCTGTCCCCGCCAGGAAGTTTGATGATGTCACCATGTTGTTTTCTGACATCGTGGGCTTCACtgcagtgtgtgcccagtgtacCCCCATGCAGGTCATCAGCATGCTCAACGAGCTCTACACACGCTTCGACTACCAGTGTGGAATACTGGATGTGTATAAGATTGAGACTATAGGCGACGCCTACTGTGTTGCGGGCGGGCTCCACCAGAAGATTGACAGCCATGCCAAGCCAATCGCACTCATGGCCCTGAAGATGATGGAGCTGTCAGAGGAGGTGTTAACGCCGGACAGCAAATCCATCAAGCTGCGTATAGGTATCCATACAGGCTCAGTGTTGGCGGGGGTGGTTGGGGTGAGGATGCCCAGGTACTGTCTGTTTGGCAACAACGTCACACTGGCCAGCAAGTTTGAGTCTGGCAGCCACCCTCGATGCATCAACGTCAGCCCAACCACATACCGGCTGCTGAAAGACGATTGCTCTTTCTCTTTCGTCCCTCGTTCCCGGTTGGAGCTTCCTGATAATTTTCCTAAGGATATCCCGGGAACATGCTACTTCCTGGAGGGGGGGACTTCCCATAGCCATGCCTCCCTGACAAGCTCCCGCTCCGCCCCCCCAGCTCCCCTGAGGAAAGTGTCCTACAGCATCGGCACCATGTTCCTGCGAGAGACGAGTCTATAGGCTCCCAATACACACACAACTCAAACCCTACAGCCATGTTTAAATGGGAGACTTATAGAGATGACAATACCCTCCTGCCCCAAACCAGGACTCAGCCCTCTTAACAACCCCCACGCTTTTCCATCTAGAAACAGACACTCCTCGCTGCaccaactacaacctgttgtTACCAAGGGCAACCTCCCTTTACCCTTCAACCCCACCAGGAATCAGACTGAAGGTTGAGAGAAGAGGAGTGAAAACAACAAGAACAACAGACAATAATAGAATCATCTAGCGACTCCAAAACTAAAGCCTTCTGCTTGTAGAACACAGCGTACTGTAACCATGGATACCACAGCTGGCTGTCATCTTGGGCATGGCAGATACTGTGTTATTATCAACAACGCTCACAACTCAGTGCCTTCCTCACTAGAAcactacatacatacacaacatGGGAGCTGGCTGAACACACAGGGAAATGGAACGAGGTCTGCAGCTCTGATGCTCCCCACAGTGATGTGTATGACTCTCCCAAATCAGTCACTGTGGGAAGCCTCGGTTGTTTTGGTCCAGCTAGCAGCTGAACCAATGGGATGTTTGGACATTTTCTCTTTCAGTTAGCTGAATGCATCCACTTCCCAGCCTGTTTGTTAACACTAAACCATGGACATAAGAAAGCAGCACATAAATACATCCATCGCCCCCCTCCAGCCAGCCGTCCGcccatcctcccccctccatctatccagcctcccccctccatccatccatcctctcccctccatccatccatcct
>TU2375270
ATGGGCTCGGAGTGCCTGGAGAGCCCTGGAGATGATGGCGACTCCTGCCCATTTTCACGCATCTGGAACGGCAAGAGCCCCGTGGAGAAGCTCGCGTGCCCGTTCGAGGACGCACAGGGACCCAAACGGGCGACAAGACGGAAGCGCGTGAACCTGGACTCGCTCGGGGAGAGCTTGAGGAGGTTAACGTCGCCCACGGTGTGCAGTTCTGTGAGCTGAGGGAGCGTTTTGGGGAGGAGTTCTTCGGTCTGTGTTTCGAGGAGAACGAGCGGGTTCTAAGAGCGGTGGGAGGGAACCTGCAGGACTTCTTCAACGGCTTTGACGCAATCTTAGAACACATCAGAACCTCGACCGGACGCCGTGCCTCCTCAGAGAGCCCCTCCTTTCAATGCAAAGACCCTcacgaggaggagagaggaagaggaagggagagggtggAAGGAAagcttctcctcctccactgcttTAACCCCGCCCCTGTCGTGGGATTGGCTATGCCTGGTCTGATCCGAGCCGTCGCACGCCGAATCTTCCACTCCCAAGTTGTGGTGAAGGAAGCCCCTCCCCTAGCGCCCTTGTCGCCCAATGAGGACGCAGAACACTCAGGAGGAGACTCCACCCCTACACcgaccccctctccttccccgtctgccc

Function

NR:

description
LOW QUALITY PROTEIN: guanylate cyclase soluble subunit alpha-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965275.1 False 3567 mRNA 0.55 9 35014631 35111042
TU2375270 True 654 TUCP 0.60 2 35015179 35030337

Neighbor

gene id symbol gene type direction distance location
cwf19l2 cwf19l2 coding upstream 4827 34970520 ~ 35009804 (+)
rtor1 rtor1 coding upstream 60497 34953147 ~ 34954134 (+)
LOC110507209 LOC106581391 coding upstream 72424 34941254 ~ 34942207 (+)
LOC110507208 LOC106581391 coding upstream 78526 34934043 ~ 34936105 (+)
LOC118944681 LOC106580957 coding upstream 86861 34926709 ~ 34927770 (+)
LOC110507973 LOC106581395 coding downstream 44964 35156006 ~ 35164459 (+)
LOC110507975 LOC106581363 coding downstream 354657 35465699 ~ 35519109 (+)
LOC110507976 LOC106581370 coding downstream 693492 35804534 ~ 35822884 (+)
LOC110507977 fzd4 coding downstream 894383 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 1254613 36365655 ~ 36381011 (+)
G2077480 NA non-coding upstream 1530 35012779 ~ 35013101 (+)
G2077364 NA non-coding upstream 55159 34959214 ~ 34959472 (+)
G2077326 NA non-coding upstream 126516 34887840 ~ 34888115 (+)
G2077302 NA non-coding upstream 169820 34844582 ~ 34844811 (+)
G2077237 NA non-coding upstream 251282 34762986 ~ 34763349 (+)
G2077482 NA non-coding downstream 740 35111782 ~ 35112897 (+)
G2077542 NA non-coding downstream 24572 35135614 ~ 35136315 (+)
G2077555 NA non-coding downstream 45658 35156700 ~ 35156923 (+)
G2077556 NA non-coding downstream 47053 35158095 ~ 35158785 (+)
G2077637 NA non-coding downstream 58201 35169243 ~ 35171351 (+)
G2076102 NA other upstream 300075 34712576 ~ 34714556 (+)
G2076000 NA other upstream 511926 34502249 ~ 34502705 (+)
robo1 robo1 other upstream 1079730 33391192 ~ 33935721 (+)
G2075724 NA other upstream 1115008 33899277 ~ 33899623 (+)
G2075687 NA other upstream 1196643 33817532 ~ 33817988 (+)
G2077547 NA other downstream 35102 35146144 ~ 35146669 (+)
G2077777 NA other downstream 359288 35470330 ~ 35513513 (+)
G2078087 NA other downstream 573093 35684135 ~ 35692833 (+)
G2078188 NA other downstream 686530 35797572 ~ 35797990 (+)

Expression


Co-expression Network