G2077480


Basic Information

Item Value
gene id G2077480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35012779 ~ 35013101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2375266
gggcaggtagtgttttcCTGGTATCtttcaaacccagatttgtccgttggattgccagatggtgaagcgtgattcatcactccagagaacacgtttccactgctccagagtccaatggcggcgagctttacaccactccagctaacgcttggcattgtgcaagCTTGGCCAtgtaaacccatttcataaagctcctgacgaacagttcttgtcgTGACTTTGTTTCCAAATGTAGTTTGGAACTTGgcggtgagtgttgcaactgaggacagacgattttcacATGTTAGACGCTgcggcactcggcggtcccattctgtgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2375266 True 323 lncRNA 0.50 1 35012779 35013101

Neighbor

gene id symbol gene type direction distance location
cwf19l2 cwf19l2 coding upstream 2975 34970520 ~ 35009804 (+)
rtor1 rtor1 coding upstream 58645 34953147 ~ 34954134 (+)
LOC110507209 LOC106581391 coding upstream 70572 34941254 ~ 34942207 (+)
LOC110507208 LOC106581391 coding upstream 76674 34934043 ~ 34936105 (+)
LOC118944681 LOC106580957 coding upstream 85009 34926709 ~ 34927770 (+)
gucy1a2 LOC106581392 coding downstream 1530 35014631 ~ 35111042 (+)
LOC110507973 LOC106581395 coding downstream 142905 35156006 ~ 35164459 (+)
LOC110507975 LOC106581363 coding downstream 452598 35465699 ~ 35519109 (+)
LOC110507976 LOC106581370 coding downstream 791433 35804534 ~ 35822884 (+)
LOC110507977 fzd4 coding downstream 992324 36005425 ~ 36012334 (+)
G2077364 NA non-coding upstream 53307 34959214 ~ 34959472 (+)
G2077326 NA non-coding upstream 124664 34887840 ~ 34888115 (+)
G2077302 NA non-coding upstream 167968 34844582 ~ 34844811 (+)
G2077237 NA non-coding upstream 249430 34762986 ~ 34763349 (+)
G2077233 NA non-coding upstream 251652 34760832 ~ 34761127 (+)
G2077486 NA non-coding downstream 5434 35018535 ~ 35019135 (+)
G2077482 NA non-coding downstream 98681 35111782 ~ 35112897 (+)
G2077542 NA non-coding downstream 122513 35135614 ~ 35136315 (+)
G2077555 NA non-coding downstream 143599 35156700 ~ 35156923 (+)
G2077556 NA non-coding downstream 144994 35158095 ~ 35158785 (+)
G2076102 NA other upstream 298223 34712576 ~ 34714556 (+)
G2076000 NA other upstream 510074 34502249 ~ 34502705 (+)
robo1 robo1 other upstream 1077878 33391192 ~ 33935721 (+)
G2075724 NA other upstream 1113156 33899277 ~ 33899623 (+)
G2075687 NA other upstream 1194791 33817532 ~ 33817988 (+)
G2077547 NA other downstream 133043 35146144 ~ 35146669 (+)
G2077777 NA other downstream 457229 35470330 ~ 35513513 (+)
G2078087 NA other downstream 671034 35684135 ~ 35692833 (+)

Expression


Co-expression Network