G2082147


Basic Information

Item Value
gene id G2082147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39945852 ~ 39946484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380813
ctttaGTTGATTTACTAAATATTTCCTTAACtcttatttcttgaactgcattgttggttaaggacttgtaagtaagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacagtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacgataaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctacctacacctgttgtattcagcatttcacggtaaggtctatctacacctgttgtattcggcgcatattaca

Function

NR:

description
uncharacterized protein LOC110520745

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380813 True 633 lncRNA 0.41 1 39945852 39946484

Neighbor

gene id symbol gene type direction distance location
LOC110507223 LOC106613251 coding upstream 7773 39781189 ~ 39938079 (+)
LOC110507222 LOC106581437 coding upstream 244640 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 264292 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 906227 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1317682 38619550 ~ 38628170 (+)
ssr3 LOC106581450 coding downstream 348347 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 714762 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 720533 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 745919 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 894222 40840706 ~ 40847141 (+)
G2082145 NA non-coding upstream 40 39945604 ~ 39945812 (+)
G2081950 NA non-coding upstream 5497 39940074 ~ 39940355 (+)
G2081943 NA non-coding upstream 22135 39923502 ~ 39923717 (+)
G2081942 NA non-coding upstream 23802 39921825 ~ 39922050 (+)
G2082163 NA non-coding downstream 12380 39958864 ~ 39959203 (+)
G2082164 NA non-coding downstream 13691 39960175 ~ 39960409 (+)
G2082172 NA non-coding downstream 40119 39986603 ~ 39987111 (+)
G2082178 NA non-coding downstream 49799 39996283 ~ 39996514 (+)
G2082179 NA non-coding downstream 53192 39999676 ~ 39999882 (+)
G2081949 NA other upstream 12017 39931874 ~ 39933835 (+)
G2081884 LOC106581433 other upstream 108469 39827658 ~ 39837383 (+)
G2080014 NA other upstream 2000701 37944932 ~ 37945151 (+)
G2079657 NA other upstream 2126566 37815848 ~ 37819286 (+)
G2082162 NA other downstream 10731 39957215 ~ 39957751 (+)
G2083005 NA other downstream 1034886 40981370 ~ 40984854 (+)
G2083239 NA other downstream 1265720 41212204 ~ 41212772 (+)
LOC110507232 LOC106593204 other downstream 1559875 41485189 ~ 41507173 (+)

Expression


Co-expression Network