G2082987


Basic Information

Item Value
gene id G2082987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40942502 ~ 40942830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381868
GCCTGCTGGCTCTATACAGTACGTATCTTACAATCTAGTACTCTTGGCCTGCTGGCTCTAAACAGTACGTATCTTACAATCTAGTACTCTTGGCCTGCTGGCTCTAAACAGTACGTATCTTACAATCTAGTACTCTTGGCCTGCTGGCTCTAAACAGTACGTATCTTACAATCTAGTCCTCTTGGCCTGCTGGCTCTATACAGTATTTCccccaaagtaaaaaaaaaagaaaatccatTAATAGAATGTGAATACTCTGTGCCCTAATTTTGATATTTTTGATGAGGTTTTGATATTTTTGTATCCCAAGTGCATCCATTAATTAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381868 True 329 lncRNA 0.39 1 40942502 40942830

Neighbor

gene id symbol gene type direction distance location
LOC118944684 LOC106613262 coding upstream 35189 40904514 ~ 40907313 (+)
LOC110507226 LOC106581479 coding upstream 64400 40857130 ~ 40878102 (+)
LOC110508042 LOC106613262 coding upstream 95361 40840706 ~ 40847141 (+)
LOC110507225 LOC106581476 coding upstream 102438 40692403 ~ 40840064 (+)
LOC118944712 NA coding upstream 273870 40667017 ~ 40668632 (+)
LOC110508044 LOC106581474 coding downstream 49248 40992078 ~ 40996568 (+)
LOC110507231 LOC106581468 coding downstream 220413 41163243 ~ 41168484 (+)
LOC110508049 LOC106581477 coding downstream 237656 41180486 ~ 41185464 (+)
LOC110508050 LOC106581466 coding downstream 251970 41194800 ~ 41203695 (+)
LOC110507232 LOC106593204 coding downstream 542359 41485189 ~ 41507173 (+)
G2082985 NA non-coding upstream 1439 40940761 ~ 40941063 (+)
G2082974 NA non-coding upstream 9499 40932743 ~ 40933003 (+)
G2082897 NA non-coding upstream 10942 40851799 ~ 40931560 (+)
G2082922 NA non-coding upstream 44957 40895416 ~ 40897545 (+)
G2083002 NA non-coding downstream 34323 40977153 ~ 40977372 (+)
G2083162 NA non-coding downstream 197738 41140568 ~ 41140779 (+)
G2083190 NA non-coding downstream 228336 41171166 ~ 41172307 (+)
G2083193 NA non-coding downstream 231103 41173933 ~ 41174215 (+)
G2083217 NA non-coding downstream 256192 41199022 ~ 41199342 (+)
G2082162 NA other upstream 984751 39957215 ~ 39957751 (+)
G2081949 NA other upstream 1008667 39931874 ~ 39933835 (+)
LOC110507223 LOC106613251 other upstream 1029424 39781189 ~ 39938079 (+)
G2081884 LOC106581433 other upstream 1105119 39827658 ~ 39837383 (+)
G2083005 NA other downstream 38540 40981370 ~ 40984854 (+)
G2083239 NA other downstream 269374 41212204 ~ 41212772 (+)
G2083851 NA other downstream 1028429 41971259 ~ 42112036 (+)
G2084156 NA other downstream 1317693 42260523 ~ 42261637 (+)

Expression


Co-expression Network