G2083217


Basic Information

Item Value
gene id G2083217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41199022 ~ 41199342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382117
accggaagaaatggaatccagttagttggatttaccaacaaaaaactccccggataatgacgacaatggcgacatcgtgtggaatctgtaggaattgcatgcaggtccataattaattttgtgcccttttaacaatccatgaaagtgacgcatggatattatttttagctttcagtgagcagtttttcttgcgcttttcgatgaaacacacgatctgttatagtcacagccgtgatttaaccagttttagaaacttcagagtgttttctatccacacatactaatcatatgcatatactatattcctggcatgagtagcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382117 True 321 lncRNA 0.39 1 41199022 41199342

Neighbor

gene id symbol gene type direction distance location
LOC110508049 LOC106581477 coding upstream 13558 41180486 ~ 41185464 (+)
LOC110507231 LOC106581468 coding upstream 30538 41163243 ~ 41168484 (+)
LOC110508044 LOC106581474 coding upstream 202454 40992078 ~ 40996568 (+)
LOC118944684 LOC106613262 coding upstream 291709 40904514 ~ 40907313 (+)
LOC110507226 LOC106581479 coding upstream 320920 40857130 ~ 40878102 (+)
LOC110507232 LOC106593204 coding downstream 285847 41485189 ~ 41507173 (+)
dhx36 dhx36 coding downstream 322104 41521446 ~ 41571922 (+)
LOC118944685 NA coding downstream 579579 41778921 ~ 41781836 (+)
LOC110507284 sucnr1 coding downstream 1032016 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 1199347 42398689 ~ 42416136 (+)
G2083193 NA non-coding upstream 24807 41173933 ~ 41174215 (+)
G2083190 NA non-coding upstream 26715 41171166 ~ 41172307 (+)
G2083162 NA non-coding upstream 58243 41140568 ~ 41140779 (+)
G2083002 NA non-coding upstream 221650 40977153 ~ 40977372 (+)
G2082987 NA non-coding upstream 256192 40942502 ~ 40942830 (+)
G2083233 NA non-coding downstream 10869 41210211 ~ 41210772 (+)
G2083251 NA non-coding downstream 39791 41239133 ~ 41239467 (+)
G2083351 NA non-coding downstream 121064 41320406 ~ 41320649 (+)
G2083358 NA non-coding downstream 124485 41323827 ~ 41324040 (+)
G2083370 NA non-coding downstream 134431 41333773 ~ 41338022 (+)
G2083005 NA other upstream 214168 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 352983 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1241271 39957215 ~ 39957751 (+)
G2081949 NA other upstream 1265187 39931874 ~ 39933835 (+)
LOC110507223 LOC106613251 other upstream 1285944 39781189 ~ 39938079 (+)
G2083239 NA other downstream 12862 41212204 ~ 41212772 (+)
G2083851 NA other downstream 771917 41971259 ~ 42112036 (+)
G2084156 NA other downstream 1061181 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1863946 43063288 ~ 43064257 (+)

Expression


Co-expression Network