G2083471


Basic Information

Item Value
gene id G2083471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41445880 ~ 41446525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382401
GGTAAGGTGCACTaccataaataaaatatattaatagATCCTTGCCTTGCAAGCCAAAGGGTTATTAAGGGTGGGATATAGTAGGTGTTGTTAGATAGGACGGTAATTTTGTACAAATAGGATAGCCATCAATTCAAAAGACATACCTAAATAAAGTCCTAACCTAAGTAGTCTATCTGTATATGGGAAGTAGTCTGACTATGAAaagtagcagtagatatattaaAACAGGTGAGGATATAAACTAGGCTTGGTGAGAAAGGAAGGTAATTCTATGCGAACAGGATAACTTCACCTATTCAATACTGAAATAATATCCaaaaaaggaggagagggaaacctAATGTAGCGGAGTGAGATACAAGATATTTGGGTACTTTAAAAGCCCTCTAAAACAACCCGAGGTTAACTAGGAATGTATAGCCCCTGGGTAATAGCTTATAGTTGTGCAAGTGAGATCTAATGTCCAATCGACAGTCAACGCTATAGATAACGTTTCTAGAAAGGAGAAACGCATATAGAATTCCATACACGTAGATTGTAAGcattaaagagacacacacatagttaGGCAGGAGTGCAACTATAGTAACTAGGTAACGGTAAACAGCACATACATAGATCATAGAAATATATACACCTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382401 True 646 lncRNA 0.37 1 41445880 41446525

Neighbor

gene id symbol gene type direction distance location
LOC110508050 LOC106581466 coding upstream 242185 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 260416 41180486 ~ 41185464 (+)
LOC110507231 LOC106581468 coding upstream 277396 41163243 ~ 41168484 (+)
LOC110508044 LOC106581474 coding upstream 449312 40992078 ~ 40996568 (+)
LOC118944684 LOC106613262 coding upstream 538567 40904514 ~ 40907313 (+)
LOC110507232 LOC106593204 coding downstream 38664 41485189 ~ 41507173 (+)
dhx36 dhx36 coding downstream 74921 41521446 ~ 41571922 (+)
LOC118944685 NA coding downstream 332396 41778921 ~ 41781836 (+)
LOC110507284 sucnr1 coding downstream 784833 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 952164 42398689 ~ 42416136 (+)
G2083466 NA non-coding upstream 2786 41442752 ~ 41443094 (+)
G2083403 NA non-coding upstream 52697 41391374 ~ 41393183 (+)
G2083398 NA non-coding upstream 79288 41362562 ~ 41366592 (+)
G2083384 NA non-coding upstream 101341 41344295 ~ 41344539 (+)
G2083382 NA non-coding upstream 102504 41342987 ~ 41343376 (+)
G2083477 NA non-coding downstream 2777 41449302 ~ 41449680 (+)
G2083479 NA non-coding downstream 4295 41450820 ~ 41451064 (+)
G2083495 NA non-coding downstream 21495 41468020 ~ 41468336 (+)
G2083517 NA non-coding downstream 44950 41491475 ~ 41491730 (+)
G2083239 NA other upstream 233108 41212204 ~ 41212772 (+)
G2083005 NA other upstream 461026 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 599841 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1488129 39957215 ~ 39957751 (+)
G2081949 NA other upstream 1512045 39931874 ~ 39933835 (+)
G2083851 NA other downstream 524734 41971259 ~ 42112036 (+)
G2084156 NA other downstream 813998 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1616763 43063288 ~ 43064257 (+)
G2085037 NA other downstream 2085745 43532270 ~ 43532578 (+)

Expression


Co-expression Network