G2083560


Basic Information

Item Value
gene id G2083560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41573462 ~ 41575975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382500
TCATCTGCAATATAAATCTATAGCTGTGGATTACATACGTTTAAAACAGAAGTTATTAGTTACATATTTACATGGGTTAAATGTGTGTCATCACAGTTTATCCCTGAGTGCAAATGAAACTTTTTTTTTGTCTGGGTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACcaggtgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctggtTTGATGAACAGCGTTGCAACAGGAAGCTGATCAGGCCATTCTTTGTTTCCCTTAGCAACGCAAGACAGAATTACACACTTAACAGATGAATCACGTCCGGACGATCATGTTGAAACCTTGGCTTTTCCCAGTTTCAGAACCCAGAGCGTCGCACCGGTTCAGTTTCTCTCCTGCCGCTCGTCACAGAAATCAATAAGGAGGGTATTTGTTTTTAAAACTTCCAGCTCTGGGCCTTCTAAAAGCCACCCCCGGGCATCATCACACCGACGGAGGTTTGTGGGACGGAAAGGTCTCTGTTTATGTAAGGTGACATTAAGATGGAGATATAAAGTGCCCAATTACAGATGGACTTCCAGGCCCTAGGCAGTGTGTAACGCTGAACGAACTGCATATGTAACCATGGTTCAAAGGTGAAGCTATGCCCATACTGCTAATACCTGTTCAATAGTTTTAAGGTATCTAAAATGGCTAGGGAATCGGGGTTAGGAGATGTTGAGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGCGCATGAATGTGGGAGTTTCTTTTGTACTTTGTAGGCCATCATAACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCGCTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTTTGGCTCCTACTGGCCACACAGGGAAGTCTAGAAATGATCCGTTTATTTGGCCATTTTGGACCGTCGTCACATTCAGTTACATTACAAAAGGCCTCCTAGCCACACACAGACAAGTCTAAAGTGTCATTTGTGTGTCTACAATGAGCCTCTTCCCCAACAGTCTCATCACACACTATAACCTGACCACAGAGCAGAAGTGAAActgacctgtcccatcacaacaacCTGGCACTTTAAAAAGCATGACAGAAAATATACTAATATAAATCTTGGTTATGTAGTACAGAAGTTAAGCTTCATTCCTGGGGAGTCTTTCAGAAGGAAATTAAATGAATACATGTTATACTAGTTGTAATCTACGTGGCAGTTTTAAACTTTGACCCCAGCACGTTCTGTGTGCACGTGTGTCCAAGTGGGATGTCCTTCGGGGCCAAAAAGCAGTCACACGGGCAGTGGTTGGACAGTCTTCCATCAGTGGGAGGAGTCAAAGTGTTGTTGACAGGTCATAGGGTCAAACTTCCTTACCATAGAGATTGGTAGAATATGGAGAATGTTAGACTGCATGGGTAACAATCACTGGACCCCAAACCCATTCTAATAGATGCAGTCAGCTGGCATACCTGTGTCTGTTGACCACAGAGAGATTATATTGGTGCATTTAGTGGCAGTCAGCACTCTCATTGGTTGATAGTGCTTGAAGGTGGCTCATTGGTGTATTCAGTCGCTGGCAGAAAGATCTCACACATTGCTCTGTTGACCAAGGAGACTTGGTGTGTTCAGTGGAGGGCTGTTGCTGGCATAAAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTTACTGGTGTATTTAATGGGTGGAGCCTGCAGTTCCAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTCACTGGTGTATTTAGTGGGTGGAGCCTGCAGTTCCAGCTCACACATTGGTTTCCAGCCCCTGGAGGCGGTCCATCCTCTGCACGTTGCGCTCAATAGTGGCCTGGCACATGATTGGTTCAGCACATTCTGACAGGAACCAACCCCTCTCGCCATCACGGAGTCGCTCGCCCTCATACC
>TU2382501
TCATCTGCAATATAAATCTATAGCTGTGGATTACATACGTTTAAAACAGAAGTTATTAGTTACATATTTACATGGGTTAAATGTGTGTCATCACAGTTTATCCCTGAGTGCAAATGAAACTTTTTTTTTGTCTGGGTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACcaggtgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctggtTTGATGAACAGCGTTGCAACAGGAAGCTGATCAGGCCATTCTTTGTTTCCCTTAGCAACGCAAGACAGAATTACACACTTAACAGATGAATCACGTCCGGACGATCATGTTGAAACCTTGGCTTTTCCCAGTTTCAGAACCCAGAGCGTCGCACCGGTTCAGTTTCTCTCCTGCCGCTCGTCACAGAAATCAATAAGGAGGGTATTTGTTTTTAAAACTTCCAGCTCTGGGCCTTCTAAAAGCCACCCCCGGGCATCATCACACCGACGGAGGTTTGTGGGACGGAAAGGTCTCTGTTTATGTAAGGTGACATTAAGATGGAGATATAAAGTGCCCAATTACAGATGGACTTCCAGGCCCTAGGCAGTGTGTAACGCTGAACGAACTGCATATGTAACCATGGTTCAAAGGTGAAGCTATGCCCATACTGCTAATACCTGTTCAATAGTTTTAAGGTATCTAAAATGGCTAGGGAATCGGGGTTAGGAGATGTTGAGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGCGCATGAATGTGGGAGTTTCTTTTGTACTTTGTAGGCCATCATAACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCGCTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTTTGGCTCCTACTGGCCACACAGGGAAGTCTAGAAATGATCCGTTTATTTGGCCATTTTGGACCGTCGTCACATTCAGTTACATTACAAAAGGCCTCCTAGCCACACACAGACAAGTCTAAAGTGTCATTTGTGTGTCTACAATGAGCCTCTTCCCCAACAGTCTCATCACACACTATAACCTGACCACAGAGCAGAAGTGAAActgacctgtcccatcacaacaacCTGGCACTTTAAAAAGCATGACAGAAAATATACTAATATAAATCTTGGTTATGTAGTACAGAAGTTAAGCTTCATTCCTGGGGAGTCTTTCAGAAGGAAATTAAATGAATACATGTTATACTAGTTGTAATCTACGTGGCAGTTTTAAACTTTGACCCCAGCACGTTCTGTGTGCACGTGTGTCCAAGTGGGATGTCCTTCGGGGCCAAAAAGCAGTCACACGGGCAGTGGTTGGACAGTCTTCCATCAGTGGGAGGAGTCAAAGTGTTGTTGACAGGTCATAGGGTCAAACTTCCTTACCATAGAGATTGGTAGAATATGGAGAATGTTAGACTGCATGGGTAACAATCACTGGACCCCAAACCCATTCTAATAGATGCAGTCAGCTGGCATACCTGTGTCTGTTGACCACAGAGAGATTATATTGGTGCATTTAGTGGCAGTCAGCACTCTCATTGGTTGATAGTGCTTGAAGGTGGCTCATTGGTGTATTCAGTCGCTGGCAGAAAGATCTCACACATTGCTCTGTTGACCAAGGAGACTTGGTGTGTTCAGTGGAGGGCTGTTGCTGGCATAAAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTTACTGGTGTATTTAATGGGTGGAGCCTGCAGTTCCAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTCACTGGTGTATTTAGTGGGTGGAGCCTGCAGTTCCAGCTCACACATTGGTTTCCAGCCCCTGGAGGCGGTCCATCCTCTGCACGTTGCGCTCAATAGTGGCCTGGCACATGATTGGTTCAGCACATTCTGACAGGAACCAACCCCTCTCGCCATCACGGAGTCGCTCGCCCTCATACC
>TU2382502
TCATCTGCAATATAAATCTATAGCTGTGGATTACATACGTTTAAAACAGAAGTTATTAGTTACATATTTACATGGGTTAAATGTGTGTCATCACAGTTTATCCCTGAGTGCAAATGAAACTTTTTTTTTGTCTGGGTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACcaggtgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctggtTTGATGAACAGCGTTGCAACAGGAAGCTGATCAGGCCATTCTTTGTTTCCCTTAGCAACGCAAGACAGAATTACACACTTAACAGATGAATCACGTCCGGACGATCATGTTGAAACCTTGGCTTTTCCCAGTTTCAGAACCCAGAGCGTCGCACCGGTTCAGTTTCTCTCCTGCCGCTCGTCACAGAAATCAATAAGGAGGGTATTTGTTTTTAAAACTTCCAGCTCTGGGCCTTCTAAAAGCCACCCCCGGGCATCATCACACCGACGGAGGTTTGTGGGACGGAAAGGTCTCTGTTTATGTAAGGTGACATTAAGATGGAGATATAAAGTGCCCAATTACAGATGGACTTCCAGGCCCTAGGCAGTGTGTAACGCTGAACGAACTGCATATGTAACCATGGTTCAAAGGTGAAGCTATGCCCATACTGCTAATACCTGTTCAATAGTTTTAAGGTATCTAAAATGGCTAGGGAATCGGGGTTAGGAGATGTTGAGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGCGCATGAATGTGGGAGTTTCTTTTGTACTTTGTAGGCCATCATAACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCGCTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTTTGGCTCCTACTGGCCACACAGGGAAGTCTAGAAATGATCCGTTTATTTGGCCATTTTGGACCGTCGTCACATTCAGTTACATTACAAAAGGCCTCCTAGCCACACACAGACAAGTCTAAAGTGTCATTTGTGTGTCTACAATGAGCCTCTTCCCCAACAGTCTCATCACACACTATAACCTGACCACAGAGCAGAAGTGAAActgacctgtcccatcacaacaacCTGGCACTTTAAAAAGCATGACAGAAAATATACTAATATAAATCTTGGTTATGTAGTACAGAAGTTAAGCTTCATTCCTGGGGAGTCTTTCAGAAGGAAATTAAATGAATACATGTTATACTAGTTGTAATCTACGTGGCAGTTTTAAACTTTGACCCCAGCACGTTCTGTGTGCACGTGTGTCCAAGTGGGATGTCCTTCGGGGCCAAAAAGCAGTCACACGGGCAGTGGTTGGACAGTCTTCCATCAGTGGGAGGAGTCAAAGTGTTGTTGACAGGTCATAGGGTCAAACTTCCTTACCATAGAGATTGGTAGAATATGGAGAATGTTAGACTGCATGGGTAACAATCACTGGACCCCAAACCCATTCTAATAGATGCAGTCAGCTGGCATACCTGTGTCTGTTGACCACAGAGAGATTATATTGGTGCATTTAGTGGCAGTCAGCACTCTCATTGGTTGATAGTGCTTGAAGGTGGCTCATTGGTGTATTCAGTCGCTGGCAGAAAGATCTCACACATTGCTCTGTTGACCAAGGAGACTTGGTGTGTTCAGTGGAGGGCTGTTGCTGGCATAAAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTTACTGGTGTATTTAATGGGTGGAGCCTGCAGTTCCAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTCACTGGTGTATTTAGTGGGTGGAGCCTGCAGTTCCAGCTCACACATTGGTTTCCAGCCCCTGGAGGCGGTCCATCCTCTGCACGTTGCGCTCAATAGTGGCCTGGCACATGATTGGTTCAGCACATTCTGACAGGAACCAACCCCTCTCGCCATCACGGAGTCGCTCGCCCTCATACC
>TU2382505
TCATCTGCAATATAAATCTATAGCTGTGGATTACATACGTTTAAAACAGAAGTTATTAGTTACATATTTACATGGGTTAAATGTGTGTCATCACAGTTTATCCCTGAGTGCAAATGAAACTTTTTTTTTGTCTGGGTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctgggTCAGACcaggtgtagagtagtggtctgggTCAGACCagatgtagagtagtggtctggtTTGATGAACAGCGTTGCAACAGGAAGCTGATCAGGCCATTCTTTGTTTCCCTTAGCAACGCAAGACAGAATTACACACTTAACAGATGAATCACGTCCGGACGATCATGTTGAAACCTTGGCTTTTCCCAGTTTCAGAACCCAGAGCGTCGCACCGGTTCAGTTTCTCTCCTGCCGCTCGTCACAGAAATCAATAAGGAGGGTATTTGTTTTTAAAACTTCCAGCTCTGGGCCTTCTAAAAGCCACCCCCGGGCATCATCACACCGACGGAGGTTTGTGGGACGGAAAGGTCTCTGTTTATGTAAGGTGACATTAAGATGGAGATATAAAGTGCCCAATTACAGATGGACTTCCAGGCCCTAGGCAGTGTGTAACGCTGAACGAACTGCATATGTAACCATGGTTCAAAGGTGAAGCTATGCCCATACTGCTAATACCTGTTCAATAGTTTTAAGGTATCTAAAATGGCTAGGGAATCGGGGTTAGGAGATGTTGAGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGGAGGTGTTGGGAATCGGGGTTAGCGCATGAATGTGGGAGTTTCTTTTGTACTTTGTAGGCCATCATAACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCGCTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTCTGCCATTTTGGCTCCTTACATTCAGCCTCACTCTACTGTAACCTTCTAACCAGAGGGAAGTCAGGAAACTGGACCGGTCATTTTGGCTCCTACTGGCCACACAGGGAAGTCTAGAAATGATCCGTTTATTTGGCCATTTTGGACCGTCGTCACATTCAGTTACATTACAAAAGGCCTCCTAGCCACACACAGACAAGTCTAAAGTGTCATTTGTGTGTCTACAATGAGCCTCTTCCCCAACAGTCTCATCACACACTATAACCTGACCACAGAGCAGAAGTGAAActgacctgtcccatcacaacaacCTGGCACTTTAAAAAGCATGACAGAAAATATACTAATATAAATCTTGGTTATGTAGTACAGAAGTTAAGCTTCATTCCTGGGGAGTCTTTCAGAAGGAAATTAAATGAATACATGTTATACTAGTTGTAATCTACGTGGCAGTTTTAAACTTTGACCCCAGCACGTTCTGTGTGCACGTGTGTCCAAGTGGGATGTCCTTCGGGGCCAAAAAGCAGTCACACGGGCAGTGGTTGGACAGTCTTCCATCAGTGGGAGGAGTCAAAGTGTTGTTGACAGGTCATAGGGTCAAACTTCCTTACCATAGAGATTGGTAGAATATGGAGAATGTTAGACTGCATGGGTAACAATCACTGGACCCCAAACCCATTCTAATAGATGCAGTCAGCTGGCATACCTGTGTCTGTTGACCACAGAGAGATTATATTGGTGCATTTAGTGGCAGTCAGCACTCTCATTGGTTGATAGTGCTTGAAGGTGGCTCATTGGTGTATTCAGTCGCTGGCAGAAAGATCTCACACATTGCTCTGTTGACCAAGGAGACTTGGTGTGTTCAGTGGAGGGCTGTTGCTGGCATAAAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTTACTGGTGTATTTAATGGGTGGAGCCTGCAGTTCCAGCTCACTCATTGGTGTGTCTGATTGAAGGCAGGTCACTGGTGTATTTAGTGGGTGGAGCCTGCAGTTCCAGCTCACACATTGGTTTCCAGCCCCTGGAGGCGGTCCATCCTCTGCACGTTGCGCTCAATAGTGGCCTGGCACATGATTGGTTCAGCACATTCTGACAGGAACCAACCCCTCTCGCCATCACGGAGTCGCTCGCCCTCATACC

Function

NR:

description
PREDICTED: rho guanine nucleotide exchange factor 26-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382500 False 2468 lncRNA 0.47 2 41573462 41575975
TU2382501 False 2491 lncRNA 0.47 2 41573462 41575975
TU2382502 False 2468 lncRNA 0.47 2 41573462 41575975
TU2382505 True 2491 lncRNA 0.47 2 41573462 41575975

Neighbor

gene id symbol gene type direction distance location
dhx36 dhx36 coding upstream 1540 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 66851 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 369767 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 387998 41180486 ~ 41185464 (+)
LOC110507231 LOC106581468 coding upstream 404978 41163243 ~ 41168484 (+)
LOC118944685 NA coding downstream 202946 41778921 ~ 41781836 (+)
LOC110507284 sucnr1 coding downstream 655383 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 822714 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 908881 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 915485 42491460 ~ 42492431 (+)
G2083558 NA non-coding upstream 9514 41561406 ~ 41563948 (+)
G2083559 NA non-coding upstream 10587 41562419 ~ 41562875 (+)
G2083535 NA non-coding upstream 26209 41545796 ~ 41547253 (+)
G2083532 NA non-coding upstream 52625 41520596 ~ 41520837 (+)
G2083531 NA non-coding upstream 54012 41519175 ~ 41519450 (+)
G2083736 NA non-coding downstream 167704 41743679 ~ 41743926 (+)
G2083737 NA non-coding downstream 169390 41745365 ~ 41745573 (+)
G2083743 NA non-coding downstream 175009 41750984 ~ 41751228 (+)
G2083750 NA non-coding downstream 206492 41782467 ~ 41782709 (+)
G2083752 NA non-coding downstream 207280 41783255 ~ 41783520 (+)
G2083239 NA other upstream 360690 41212204 ~ 41212772 (+)
G2083005 NA other upstream 588608 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 727423 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1615711 39957215 ~ 39957751 (+)
G2083851 NA other downstream 395284 41971259 ~ 42112036 (+)
G2084156 NA other downstream 684548 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1487313 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1956295 43532270 ~ 43532578 (+)
G2085122 NA other downstream 2156420 43732395 ~ 43733894 (+)

Expression


Co-expression Network