G2083777


Basic Information

Item Value
gene id G2083777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41813649 ~ 41814023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382780
AATcaagtcaatcaaatcaaatgtcataTGTCAAATGCtttgtagacaacaggtgtagactaacagtgaaatgctttgtagacaacaggtgtagactaacagtgaaatgctttgtagACGAagggtgtagactaacagtgaaatgctttgtagacaacaggtgtagactaacagtggaatgctttgtagacaacaggtgtagactaacagtgaaatgctttgtagacaacaggtgtagactaacagtggaatgcttacttacgggtccttttaCAACAAAGCAGAGTTAAAAATAAGATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382780 True 302 lncRNA 0.38 2 41813649 41814023

Neighbor

gene id symbol gene type direction distance location
LOC118944685 NA coding upstream 31813 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 241727 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 307038 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 609954 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 628185 41180486 ~ 41185464 (+)
LOC110507284 sucnr1 coding downstream 417335 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 584666 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 670833 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 677437 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 688519 42502542 ~ 42503473 (+)
G2083767 NA non-coding upstream 19377 41794001 ~ 41794272 (+)
G2083766 NA non-coding upstream 19735 41793616 ~ 41793914 (+)
G2083755 NA non-coding upstream 27339 41786066 ~ 41786310 (+)
G2083752 NA non-coding upstream 30129 41783255 ~ 41783520 (+)
G2083750 NA non-coding upstream 30940 41782467 ~ 41782709 (+)
G2083785 NA non-coding downstream 9840 41823863 ~ 41874849 (+)
G2083817 NA non-coding downstream 112960 41926983 ~ 41930117 (+)
G2083818 NA non-coding downstream 116645 41930668 ~ 41931352 (+)
G2083819 NA non-coding downstream 118470 41932493 ~ 41935087 (+)
G2083823 NA non-coding downstream 123983 41938006 ~ 41938371 (+)
G2083239 NA other upstream 600877 41212204 ~ 41212772 (+)
G2083005 NA other upstream 828795 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 967610 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1855898 39957215 ~ 39957751 (+)
G2083851 NA other downstream 157236 41971259 ~ 42112036 (+)
G2084156 NA other downstream 446500 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1249265 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1718247 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1918372 43732395 ~ 43733894 (+)

Expression


Co-expression Network