G2083817


Basic Information

Item Value
gene id G2083817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41926983 ~ 41930117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382838
agCAAGAATCATATAAAGCATCAGAACATTGGAGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGAAAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTGACACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCATACATGATATAGAACCCTGGTGACAGGATTCATACATGATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATATAGAACCCTGGTGACAGGATTCACACATGATAGAACCCTGGTGACAGGATTGACACATGATAGAACCCTGGTGACAAGATTCACACATGATAATGATAGAACCCTGGTGAAAGGATTCACACATGAATGAACCCGGGTGACAGAACCCTGGTGACAGGATTCCCACATGATAGAACCCTGGTGACAGGATTCCCACATGATAGAACCCCGGTGACAGGATTCCCACATGATAGAACCCTGGTGGCAGGATTCACACATGATAGAACCCTGGTGACAGGGTTCACACATGATAGAACCCTGGTGACAGGATTCCCACATGACAGCCGTTGAAGCATGGTGACAGGATTCCCACATGATAGAACCCTGGTGAAAGGATCCCACATGATAGAAGCCTGGTGAAAGGATTCCCACATGATAGAAGCCTGGTGACAGGATTCCCACATGATAGAAGCCTGGTGAAAGGATTCCCACATGATAGAAGCCTTGTGACAGGATTCCCACATGATAGAAGCCTGGTAAAAGGATTCCCACATGATAGAAGCCTGGTGAAAGGATTCCCACATGATAGAACCCTGGTGACAGGATTCCAACATTAGAACCCTGGTGAAAGGATTCCAACATAACAGTCGTTGAAGTCCTATGAAAGGATTCCAACATAACAGCCGTTGTAGTCCTATGAGGGGATTCCCACGGAATAGCCATTGAAGCCCGGTGAAAGGATTCCCACATGATAGCCATTGCCAGTCAAATAATTATTTCCAAGTTAGCACAGTGCATCTTCATCAATCACTCAACTTTGTTAAGACCAGCTTTATAAACGGGAGACCAAAAAATTCCCCTGGCTAACCAATCATGCTCCTTCACTCTTATGAATACTGCTCAACATTGATTCATTTATATGGAAAATATATTATGGCTTTAGATTGTGGCTTTAGATCAGTGCTTACATAACATGTGCTTTATGGTGGACATCTGGCCACATGGCACAAATACTTTCAGGGGGCTCTGAACAATAAAATAAGCAGAGACCAAACGGCAGCAGAAGACAGAATACATCGTTTTAGCACTACAAGCTGAGAAAACGTAAAGCTCAGATTACATCATATTATAACATCAGGCATATGCTCGGGACAGATGAAAAGTCACGTCAAGGTTTGGACTAACGTTGAAGCCCGTGAGTAACACAGAAAACTGTTTATAGGTTCCCTATAGTTTACCTGGCAAACTGCTTGTACGTTTCTGTCCATTTCATCAACCAGAAGCATAGCTTCTAAACAGAAAGAGACACACTGACAGCTATTGTGTTTctgttgtatgtactgtatgtcctgtagGAGTTATAACTCTTGAAATGAGTATATTCTTAGTCTATTTAGTAAAccactgttttgtttttttgttgattttattTTAGTCCATTACAttgatattatactgtatactgtaaatgCTGTGTAACATACTGACTTATTCAATATTACTCTGTTGTGAAGTAGTTCTTTTCCAAAGGTATATGTTTTGTTCCTTTAACATGCGTTCCTTTCTGGCTAAAACAGGACTTGTTTTGATTGGTTGGGCCTGGAAGAACGTTGCCATGAAACCGGACAAAGCCAGTCAGGCCCTTTTCTCCAGAGGTTAACATCTTAATCTGAAGGTTTCCTGACAAACTAAAAGCCGCTGGCAAAAACGAAGAGCAACACATTGCCTTTTTCCGAAAGGGCTACAGAGTGAGAACTCTTGTGCCACTTTATACAAGCAGTTTAATTCAGCctttcattctttttttttaaatgatcctAGCAAAATGTATTGTTGTTATAGATATTTTTTATTCAAAATAAGATCTAGATTTTATACATGATTCTCTCttttttgactatgtacagaagTGCAAGAAAGTCAACCTTCTTCACCTAcaatgctgtgaaaaagtattt

Function

NR:

description
PREDICTED: NF-X1-type zinc finger protein NFXL2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382838 True 2788 lncRNA 0.41 3 41926983 41930117

Neighbor

gene id symbol gene type direction distance location
LOC118944685 NA coding upstream 145147 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 355061 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 420372 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 723288 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 741519 41180486 ~ 41185464 (+)
LOC110507284 sucnr1 coding downstream 301241 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 468572 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 554739 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 561343 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 572425 42502542 ~ 42503473 (+)
G2083785 NA non-coding upstream 52134 41823863 ~ 41874849 (+)
G2083777 NA non-coding upstream 112960 41813649 ~ 41814023 (+)
G2083767 NA non-coding upstream 132711 41794001 ~ 41794272 (+)
G2083766 NA non-coding upstream 133069 41793616 ~ 41793914 (+)
G2083755 NA non-coding upstream 140673 41786066 ~ 41786310 (+)
G2083818 NA non-coding downstream 551 41930668 ~ 41931352 (+)
G2083819 NA non-coding downstream 2376 41932493 ~ 41935087 (+)
G2083823 NA non-coding downstream 7889 41938006 ~ 41938371 (+)
G2083825 NA non-coding downstream 9490 41939607 ~ 41939840 (+)
G2083827 NA non-coding downstream 10363 41940480 ~ 41940684 (+)
G2083239 NA other upstream 714211 41212204 ~ 41212772 (+)
G2083005 NA other upstream 942129 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 1080944 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1969232 39957215 ~ 39957751 (+)
G2083851 NA other downstream 41142 41971259 ~ 42112036 (+)
G2084156 NA other downstream 330406 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1133171 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1602153 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1802278 43732395 ~ 43733894 (+)

Expression


Co-expression Network