G2083819


Basic Information

Item Value
gene id G2083819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41932493 ~ 41935087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382842
AGTGAAAGACAACAATCATATATACCACGAAAGCTTTGTGTGGCGACAAAACAGCAAGGGTTAGGCAAGAGGACGATTTGAAATGGCTTGTTGCATTGTGCCGACCTCGTGGTGTTTTCTAAGGCTTTGGATGAGTAATACAATCAGGTCAAGCTCTTCCATACCATGTCTTTTCATACAAGGCATGCAGAagcatgagggtttaataaaccAAAACACAATCTACACTCCCCCACGCTTCCATACACAAatttacactcacccccctcttGTCCATACACAACTTCATTTGTGATTTTGGCCCCACACATTTGCTGAACAGAGCTCCACTAGTGCACCCACATATgtcaacacagaacacagaagaAAAATACCAGAAAAACATTTGACTGTATCTATCCAAAAGCATCCATACTAtcacacattaaaatacacataaTGTGTCTTCACAAGTTCTCTCACATATCATAGACCATATAAACTGCACTTAATAAAACATACAattaaaaaaaatcattaaatTAATTATAATAAAATGAaaaccacaccatgttagaacaAATCAACCATAAGCCACCCTGTAACTCTTGGAAAGTGCTCCTCACTCCACTCAGCCGTTTGGTTTAACACGCAACTTTCAGGAGTTCTTCATTCTATCCTTCCTTTTTCACAGTCTCCACCCCTTCTTCGTCACAAGTGAGACTTTTGGCATAATATTGGGTCCAGGGCCAAAGCCCCATTCATTAAGCCTTTACAGTCTATAAACTTTAtactcagagacagagaggactgggTCCTAACAGAACCAACTAAAGTCTATAGCCTTTATACCCAGAGAGGACTGGGTCCTAACAGAACCAACTAGAGTCTATAGCCTTtatacccagagacagagaggaccaggCCCTAACAGAACCAACTAGAGTCTATAGACTTCatacccagagacagagaggaccaggtCCTAACAGAAGCAACTAGAGTCTTTAGACTTtatacccagagacagagaggaccaggtCCTAACAGAACCAACTATAGTCTATAGACTTtatacccagagacagagaggactgggTCCTAACAGAACCAACTAGAGTCTATAGACTTTttacccagagacagagaggactgggTCCTAACAAAACCAACAAGAGTCTATAGACTTtatacccagagacagagaggaccaggtCCTAACAGAACCAACTAGAGTCTATAGACTTTAtactcagagacagagaggaccaggtCCTAACAGAACCAACTAGAGTCTATAGACTTtatacccagagacagagaggaccaggtCCTAACAGAACCAACTAGAGTCTATAGACTTtatacccagagacagagaggacaaggTCCTAACAGAACCAACTAGAGACTATAGACTTCATACCCAGAGAGGACCAGGTCCTAACAGAACCAACTAGAGTCTATAGACTTTATACTCAGAGAGGACTGGGTCCTAACAGAACCAACTAGAGTCCATAGACTTtatacccagagacagagaggattggGTCCTAACAGAACCAACTAGAGTCTATAGACTTCATACTCAGAGAGGACCAGGTCCTAACATACCTAACCAAGTAGACTCTATAGACTTTATACCCAGAGAGGACTGGGTCCTAACAGAACCAACTAGACTCTATAGACTTTATACCCAGAGAGGACTGGGTCCTAACAGAACCAACTAGAGTCTATAGACTTTttacccagagacagagaggactgggTCCTAACAAAACCAACAAGAGTCTATAGACTTTATACCCGgagacagagaggaccaggtCCTAACAGAACCAACTAGAGTCTATAGACTTTATACTCAGAGACAAAGAGGACTGGGGCCTAACAGAACCAACTAGAGTATATAGACTTTATactcagagacagagaagacCAGGTCCTAACAGAACCAACTAGAGTCTATAGACTTtatacccagagacagagaggaccaggtCCTAACAGAACCAACTAGAGTCTATAGACTTtatacccagagacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382842 True 2029 lncRNA 0.42 2 41932493 41935087

Neighbor

gene id symbol gene type direction distance location
LOC118944685 NA coding upstream 150657 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 360571 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 425882 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 728798 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 747029 41180486 ~ 41185464 (+)
LOC110507284 sucnr1 coding downstream 296271 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 463602 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 549769 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 556373 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 567455 42502542 ~ 42503473 (+)
G2083818 NA non-coding upstream 1141 41930668 ~ 41931352 (+)
G2083817 NA non-coding upstream 2376 41926983 ~ 41930117 (+)
G2083785 NA non-coding upstream 57644 41823863 ~ 41874849 (+)
G2083777 NA non-coding upstream 118470 41813649 ~ 41814023 (+)
G2083767 NA non-coding upstream 138221 41794001 ~ 41794272 (+)
G2083823 NA non-coding downstream 2919 41938006 ~ 41938371 (+)
G2083825 NA non-coding downstream 4520 41939607 ~ 41939840 (+)
G2083827 NA non-coding downstream 5393 41940480 ~ 41940684 (+)
G2083830 NA non-coding downstream 6797 41941884 ~ 41942147 (+)
G2083831 NA non-coding downstream 7197 41942284 ~ 41942650 (+)
G2083239 NA other upstream 719721 41212204 ~ 41212772 (+)
G2083005 NA other upstream 947639 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 1086454 40840706 ~ 40847141 (+)
G2082162 NA other upstream 1974742 39957215 ~ 39957751 (+)
G2083851 NA other downstream 36172 41971259 ~ 42112036 (+)
G2084156 NA other downstream 325436 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1128201 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1597183 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1797308 43732395 ~ 43733894 (+)

Expression


Co-expression Network