G2083820


Basic Information

Item Value
gene id G2083820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41981618 ~ 41983708 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2382844
ctttaccctctctcctctctctgtctttctctttctccaatCACActttatcctctctcctctctctgtctttctctctatctaatCACACTTtaccctctctcctatctctgtctttctctctatctaatCACActttatcctctctcctctctctgtctttctctaatCACActttatcctctctcctctcgctgtcTTTCTCGAATCACAGtttatcctctctcttctctctgtctttctctttctctaatcacactttatcctctctcctctctgtctttctctctatcacactttaccctctctcatctctctgtctttctctttctccaatCACActttatcctctctcctctctctgtctttctctctatctaatCACActttatcctctctcctctatctgtctttctctttctctcatcacactttatcctctctactctctgtctttctctttctctaatcacactttatcctctctcctctctgtctctctctttctctaatcacacttcatcctctctcctctgtctttctctctatctgaTCACActttatcctctctcctctctgtctttctctctatctgaTCACACTTTATCCTCTACCCTCTTTGTCTTTGTAGGTCTCCATAAGAGACAAATTAGCAACAGAAGCAGAGATAAAGATGATTATCTatcgatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatcactgCCTCCTGCCAACAGATTATGATTCACaaccccagagagagaaagagagatagaaagagagatagaaacagagagagaaagagagatagaaacagagagagaaagcgcgcgagagagaggagagacaacagagaTGGAGCCGATGAAGAGCTACTGTGgacaggaaaaagagagagagagagagagagagcgagaaggaggaTATTAAAATCTAACAAGGGGAGTGTTCAGCCGAACAGCATTATGACTCGTTGACTCGTTGAAGAATTGAATCACCTCCatcatacagacagacagcaggctcCACACTACACAGCCTATATACACTATAGAAGGAGAATACTGtatatactacaatacacagccTATATCCACTATACAAGAAGAATACTGTATATACCACACGACACAGCCTATATCCACTATACAAGAAGAATACTGTATATACCACACGACACAGCCTATATACACTATAGAAGGAGAATACTGtatatactacaatacacaggcTATATACACTATAGAAGGagaatactgtatacactacactacacagcctatctctctatatacactatacaaggagaatactgtaTATACCACACTACAAGTAAATTCTCTACATAAGGAGAATTGTATCTctactctatccctctctctatacgTCTCTCTATACGtctctctattcaattcaagAGGCTTTATTGCCATGGGAAACGTGTAaatgttgccaaagcaagtggaatagacaataaaatctctctctctgtctctatacttccctatcctctcctctatctctctctctctctctctctctctctctctctctctatccctctctgtctatatatctctctctctctatctctctctctatccctatctctctctctatctctctctctatttatatctctctctatctctatatccatttctatccctctctatatctctctctatatctctgtctttctatatctctctctatatctctctctctctatatatatatatatatatatatatctatatctctctctctctctctatccctctctttatatcaattaaattcaattcaaggggctttattggcatgggaaacttgtgttaacattgccaaagcaagtgaggtagataatatacaaaagtgaaataaacaatacaaactaacagtaaacatcacacatacagaagtttcaaaacaataaagacattacaaatgtcatattatgtatatatacagtgttgttcaaatgtttaaagtacacaag

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2382844 True 2033 lncRNA 0.38 3 41981618 41983708

Neighbor

gene id symbol gene type direction distance location
LOC118944685 NA coding upstream 199782 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 409696 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 475007 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 777923 41194800 ~ 41203695 (+)
LOC110508049 LOC106581477 coding upstream 796154 41180486 ~ 41185464 (+)
LOC110507284 sucnr1 coding downstream 247650 42231358 ~ 42242002 (+)
LOC110507235 LOC106581497 coding downstream 414981 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 501148 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 507752 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 518834 42502542 ~ 42503473 (+)
G2083856 NA non-coding upstream 8813 41972235 ~ 41972805 (+)
G2083852 LOC106581498 non-coding upstream 16059 41965343 ~ 41965559 (+)
G2083848 NA non-coding upstream 16777 41964550 ~ 41964841 (+)
G2083839 NA non-coding upstream 30472 41950875 ~ 41951146 (+)
G2083836 NA non-coding upstream 31161 41949039 ~ 41950457 (+)
G2083860 NA non-coding downstream 4792 41988500 ~ 41990554 (+)
G2083887 NA non-coding downstream 65252 42048960 ~ 42049939 (+)
G2083889 NA non-coding downstream 67472 42051180 ~ 42052037 (+)
G2083905 NA non-coding downstream 98532 42082240 ~ 42098246 (+)
G2083918 NA non-coding downstream 128678 42112386 ~ 42115721 (+)
G2083239 NA other upstream 768846 41212204 ~ 41212772 (+)
G2083005 NA other upstream 996764 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 1135579 40840706 ~ 40847141 (+)
G2082162 NA other upstream 2023867 39957215 ~ 39957751 (+)
G2084156 NA other downstream 276815 42260523 ~ 42261637 (+)
G2084659 NA other downstream 1079580 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1548562 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1748687 43732395 ~ 43733894 (+)
G2085314 NA other downstream 2134515 44118223 ~ 44119239 (+)

Expression


Co-expression Network