G2084156


Basic Information

Item Value
gene id G2084156
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42260523 ~ 42261637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2383237
GTGGGTTCATTTTATTGTGAGAAAACATAACAAAATGACGCATGTCTTCAATTCTCTGTATTTCACATGAAAAACAACAAGCCATGATATTTACAAGGATTTGTAAGGAGAATACTGAATCAAAAATGAAATAGATTAGATTATCAGTCATCAAAGACATCAAAACACTTTCTCAGAAAAACGCTAATCCCATGACAATGAACACTGAGCTATATTTCCCCCAACAACATTATTCTGTAACAAATATGCAAATGGTGGTGAGGGGTGTCAGCTGAGCTGGGGAGGCTTTCTAAGGAAACATAGGGAGACCGGTAGGGAGACCATTAGCTCTATAGTAAGATCAAAGCTACTACTTTAAACTGCACTCAATTGACTGCAGCTCTGTTAAACCTCAAAGCCGGAAAATAACAGCTACACGCTCAGACTAGAAACACTCCAAACCTGACATACTGTAGGGGTTTCACCCTTTGTCCCTCCCCTCCTCATGTTGGGCCTTCCATGTCACAAGGCAGGTGGATTAAGACCcagttagacagagagaaagagaaagagaaagaaaaaaagagagaaaggaagaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagagagagagaaagagagagaaagagagagagagagagtgagagagagagagagaaagagagaaagaaagaaagaaagagagaaagagagcgagagagagaggttgggtggGTGGGGAGACACGTGAAGAGGCTCAGTACACCACACATGATGACTGGGCCTACAGCGCCTGTATGGGATGAGAACTAAACTGAAGAACACAAGTACTCTTTACTGGTCCTCAATAACAGCAGTGGAGAAAAAGTACCCAAATCTCATACTTAAAgtatgagtaaaagtaaagataccttactaGAAAATGACTTAATTAAAAGTGAAAGTAAAATAGTATAGTACTACTTGagaaaaa
>TU2383238
GTGGGTTCATTTTATTGTGAGAAAACATAACAAAATGACGCATGTCTTCAATTCTCTGTATTTCACATGAAAAACAACAAGCCATGATATTTACAAGGATTTGTAAGGAGAATACTGAATCAAAAATGAAATAGATTAGATTATCAGTCATCAAAGACATCAAAACACTTTCTCAGAAAAACGCTAATCCCATGACAATGAACACTGAGCTATATTTCCCCCAACAACATTATTCTGTAACAAATATGCAAATGGTGGTGAGGGGTGTCAGCTGAGCTGGGGAGGCTTTCTAAGGAAACATAGGGAGACCGGTAGGGAGACCATTAGCTCTATAGTAAGATCAAAGCTACTACTTTAAACTGCACTCAATTGACTGCAGCTCTGTTAAACCTCAAAGCCGGAAAATAACAGCTACACGCTCAGACTAGAAACACTCCAAACCTGACATACTGTAGGGGTTTCACCCTTTGTCCCTCCCCTCCTCATGTTGGGCCTTCCATGTCACAAGGCAGGTGGATTAAGACCcagttagacagagagaaagagaaagagaaagaaaaaaagagagaaaggaagaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagagagagagaaagagagagaaagagagagagagagagtgagagagagagagagaaagagagaaagagaaagaaagaaagaaagcgagaaagagagagagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagaaagagagaaagagagcgagagagagaggttgggtggGTGGGGAGACACGTGAAGAGGCTCAGTACACCACACATGATGACTGGGCCTACAGCGCCTGTATGGGATGAGAACTAAACTGAAGAACACAAGTACTCTTTACTGGTCCTCAATAACAGCAGTGGAGAAAAAGTACCCAAATCTCATACTTAAAgtatgagtaaaagtaaagataccttactaGAAAATGACTTAATTAAAAGTGAAAGTAAAATAGTATAGTACTACTTGagaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2383237 False 969 lncRNA 0.40 2 42260523 42261637
TU2383238 True 1043 TUCP 0.39 2 42260523 42261637

Neighbor

gene id symbol gene type direction distance location
LOC110507284 sucnr1 coding upstream 18521 42231358 ~ 42242002 (+)
LOC118944685 NA coding upstream 478687 41778921 ~ 41781836 (+)
dhx36 dhx36 coding upstream 688601 41521446 ~ 41571922 (+)
LOC110507232 LOC106593204 coding upstream 753912 41485189 ~ 41507173 (+)
LOC110508050 LOC106581466 coding upstream 1056828 41194800 ~ 41203695 (+)
LOC110507235 LOC106581497 coding downstream 137052 42398689 ~ 42416136 (+)
LOC110508060 LOC106581495 coding downstream 223219 42484856 ~ 42492905 (+)
LOC110508061 LOC106581496 coding downstream 229823 42491460 ~ 42492431 (+)
LOC110507283 LOC106581492 coding downstream 240905 42502542 ~ 42503473 (+)
LOC110508059 LOC106581491 coding downstream 249182 42510819 ~ 42515563 (+)
G2084128 NA non-coding upstream 44127 42216064 ~ 42216396 (+)
G2084111 NA non-coding upstream 55182 42205141 ~ 42205341 (+)
G2083947 NA non-coding upstream 83115 42176969 ~ 42177408 (+)
G2083925 NA non-coding upstream 134372 42125930 ~ 42126151 (+)
G2083923 NA non-coding upstream 142409 42117834 ~ 42118114 (+)
G2084250 NA non-coding downstream 59862 42321499 ~ 42321798 (+)
G2084256 NA non-coding downstream 79039 42340676 ~ 42340890 (+)
G2084264 NA non-coding downstream 93853 42355490 ~ 42355715 (+)
G2084265 NA non-coding downstream 94874 42356511 ~ 42356732 (+)
G2084274 NA non-coding downstream 100969 42362606 ~ 42362814 (+)
G2083851 NA other upstream 148487 41971259 ~ 42112036 (+)
G2083239 NA other upstream 1047751 41212204 ~ 41212772 (+)
G2083005 NA other upstream 1275669 40981370 ~ 40984854 (+)
LOC110508042 LOC106613262 other upstream 1414484 40840706 ~ 40847141 (+)
G2084659 NA other downstream 801651 43063288 ~ 43064257 (+)
G2085037 NA other downstream 1270633 43532270 ~ 43532578 (+)
G2085122 NA other downstream 1470758 43732395 ~ 43733894 (+)
G2085314 NA other downstream 1856586 44118223 ~ 44119239 (+)
G2085969 NA other downstream 2146416 44408053 ~ 44410050 (+)

Expression


Co-expression Network