G2086060


Basic Information

Item Value
gene id G2086060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44583080 ~ 44584325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385621
gctactctctgttcatcatatatgcatagtcactttaaccatatctacatgtacatactacctcaatcagcctgactaacaggtgtctgtatatagcgtTGGTagtcttttttcaaatgtatttttactgttgttttatttctttacttacctacacacacacacacacacacacactattggttagagcctgtaagtaagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcggcatttcactgtaaggtctacctacacctgttgttttcggcatttcactgtaaggtctactacacctgttgtattcggcatttcactgtaaggtctacctacacctgttgttttcggcatttcactgtaaggtctactacacctgttgttttcggcatttcactgtaaggtctactacacctgttgttttcggcgcacgtgacaaatgaactttgatttgatttgacatgaacTCTCCCCTCTCCACTTTTGGAGGATGCTTGCACTCAAATACTTGGcctctattggttgacctagcCAGCTACTCATGATGTATTGCTGGTTTGTTTTCTTGCTGTTGATGCAGTTTGAGATGATGGAACGTCCTATAGGAATGTAATGAATTACTATTATCCCAAAGATGGTTTATTtagttcagtaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385621 True 980 lncRNA 0.39 2 44583080 44584325

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 350257 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 481189 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 485044 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 492865 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 684521 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 283662 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 859580 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 896003 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 908898 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1118840 45703165 ~ 45791795 (+)
G2086055 NA non-coding upstream 2749 44579506 ~ 44580331 (+)
G2086017 NA non-coding upstream 68902 44513822 ~ 44514178 (+)
G2086009 NA non-coding upstream 78911 44502386 ~ 44504169 (+)
G2085995 NA non-coding upstream 105825 44476587 ~ 44477255 (+)
G2085987 NA non-coding upstream 116577 44465556 ~ 44466503 (+)
G2086062 NA non-coding downstream 698 44585023 ~ 44586021 (+)
G2086063 NA non-coding downstream 3864 44588189 ~ 44645563 (+)
G2086064 NA non-coding downstream 4070 44588395 ~ 44589190 (+)
G2086070 NA non-coding downstream 17379 44601704 ~ 44601988 (+)
G2086071 NA non-coding downstream 17927 44602252 ~ 44603040 (+)
G2085969 NA other upstream 173030 44408053 ~ 44410050 (+)
G2085314 NA other upstream 463841 44118223 ~ 44119239 (+)
G2085122 NA other upstream 849186 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1050502 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1518823 43063288 ~ 43064257 (+)
G2087149 NA other downstream 1212774 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1738759 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1909597 46493922 ~ 46499497 (+)

Expression


Co-expression Network