G2086079


Basic Information

Item Value
gene id G2086079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 44621160 ~ 44621516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2385654
atcccctggcatagCGCTATATTAACACAaacatcccctggcacagtgctatattaacacaaacatcccctggtacagtgttatattaaccagaccatcccctggcacagtgttatattaaccagaccatcccctggtacagtgttatattaacacaaacatcccctggcacagtgctatattaaccagaccatcccctggcacagtgctatattaacacaaacatcccctggcatggcacagtgctataaaGGAGCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2385654 True 261 lncRNA 0.46 2 44621160 44621516

Neighbor

gene id symbol gene type direction distance location
LOC110508097 LOC105006673 coding upstream 388337 44111550 ~ 44232823 (+)
LOC110507242 NA coding upstream 519269 44100049 ~ 44101891 (+)
cldn8 LOC106581534 coding upstream 523124 44095444 ~ 44098036 (+)
zgc:110333 LOC106581535 coding upstream 530945 44088591 ~ 44090215 (+)
LOC118944688 NA coding upstream 722601 43896547 ~ 43898559 (+)
cadm2b LOC106581539 coding downstream 246471 44867987 ~ 45361689 (+)
usp16 usp16 coding downstream 822389 45443905 ~ 45479066 (+)
LOC110508103 LOC106581548 coding downstream 858812 45480328 ~ 45487737 (+)
mtus2b LOC106593344 coding downstream 871707 45493223 ~ 45664305 (+)
foxo1a LOC106581554 coding downstream 1081649 45703165 ~ 45791795 (+)
G2086071 NA non-coding upstream 18120 44602252 ~ 44603040 (+)
G2086070 NA non-coding upstream 19172 44601704 ~ 44601988 (+)
G2086064 NA non-coding upstream 31970 44588395 ~ 44589190 (+)
G2086062 NA non-coding upstream 35139 44585023 ~ 44586021 (+)
G2086060 NA non-coding upstream 36835 44583080 ~ 44584325 (+)
G2086089 NA non-coding downstream 15231 44636747 ~ 44637848 (+)
G2086092 NA non-coding downstream 17885 44639401 ~ 44639946 (+)
G2086093 NA non-coding downstream 22145 44643661 ~ 44644593 (+)
G2086098 NA non-coding downstream 42894 44664410 ~ 44667294 (+)
G2086104 NA non-coding downstream 63579 44685095 ~ 44686853 (+)
G2085969 NA other upstream 211110 44408053 ~ 44410050 (+)
G2085314 NA other upstream 501921 44118223 ~ 44119239 (+)
G2085122 NA other upstream 887266 43732395 ~ 43733894 (+)
G2085037 NA other upstream 1088582 43532270 ~ 43532578 (+)
G2084659 NA other upstream 1556903 43063288 ~ 43064257 (+)
G2087149 NA other downstream 1175583 45797099 ~ 45798593 (+)
G2087569 NA other downstream 1701568 46323084 ~ 46323694 (+)
G2087592 LOC106592078 other downstream 1872406 46493922 ~ 46499497 (+)

Expression


Co-expression Network