gs04 (gs04)


Basic Information

Item Value
gene id gs04
gene name gs04
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 18225312 ~ 18228390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588579.2
ATCATAGACGCCGAGCTACAGCTCTCACGTTATAAATTAAACTGAAACATGAGTTAGAGccgagagaatgagagaacaaCTATCGGGAAAATTTTCAACATTACATTGGACCTGCCAGTCCTTTCGTTTTTATATCTGTTTTCTCGTTTTTACAGGTGTTTTATAACAAATAATATGGCTACGTCCTCCAGCGCAGAACTGAGTAAGGCTGTCAAACAGCAGTACATGGACCTCCCTCAGGGAGACAAAGTCCAAATCATGTATGTCTGGATCGATGGAACCGGAGAGGGACTCCGCTGTAAGACCAGAACGCTGGATTCGGAGCCCAAGTGCATTGAAGAACTGCCTGAATGGAACTTTGATGGCTCTAGCACCTACCAGTCTGAGGGCTCAAACAGTGATATGTATTTGATTCCTTCTGCAATGTTCAGAGATCCTTTCCGCAAAGACCCCAACAAACTGGTCCTGTGTGAAGTGCTGAAGTACAACCGCAAACCTGCAGAAACCAACCTTCGTTTGACGTGTAATAAAGTTATGGACATGGTTGAGAACCAGGTCCCTTGGTTTGGCATGGAGCAAGAGTACACCATTTTGGGCACGGATGGACACCCATTTGGCTGGCCCAACAACGGCTTCCCTGGCCCACAAGGTCCCTATTACTGTGGAGTGGGATCTGACAAGGCCTACGGTAGAGATATTGTGGAAGCCCACTACAGAGCCTGCCTGTATGCTGGGGTCATGATCTGTGGAACCAATGCTGAAGTCATGCCTGCACAGTGGGAGTTCCAGGTTGGCCCTTGTGAAGGCATCAGCATGGGTGATCACCTTTGGGCAGCTAGGTTCATTCTCCACCGGGTGTGTGAGGACTTTGGTGTGGTGGCCTCATTTGACCCCAAGCCCATCACTGGAAACTGGAACGGCGCTGGATGCCACACCAATTTCAGCACAAAAGAGATGAGGGAAGAGGGTGGTTTGAAGGCCATTGAGGAGTCCATTGAAAGGCTGGGGAAGAGGCATAGCTACCACATCCGTGCCTATGACCCTAAAGGGGGACTTGACAATGCCCGTCGCCTTACCGGCCACCATGAAACCTCCAACATCCACGAGTTCTCTGCCGGTGTGGCCAACCGCGGTGCCAGCATCCGCATCCCTCGCACTGTGGGCCAGGAGAAGAAGGGCTACTTCGAGGACCGCCGCCCATCTGCCAACTGTGACCCGTACGCCGTGACTGAGGCTATAATCCGCACCTGTTTGCTTAGTGAGGAAGGAGATGAACCTGTGAACTACTAGATCTAACTAGAGCCACACCTCTGGACTGAATCCCCTTCGCCACCACCCTTCTCCATTCTCATTTTCTAAATGGCTGAAAAGTTGAACTAGTACTGTATTTGTTGTAATTTTTCACTGAAATTATTCTAACCTTCTAAATGGCTTAAAGTTGGCTGGTCAACTTAACATGGAATTAAATCTGTTTAacataaaaacaaacatttaatgaAAGATGGTGGCTGACAGGGCATTGTCTTCCCCTTTTGAGTCTTCTAGTGGGGAGTATAACTGTTTTTAAATCCCCATTTGATCTCGCGTTTCCTGCAGTCTGTCGAACTGAAATAAACTAAAGCACATGTGGACACTGACGACTATG
>NM_001124606.1
AATAATATGGCTACGTCCTCCAGCGCAGAACTGAGTAAGGCTGTCAAACAGCAGTACATGGACCTCCCTCAGGGAGACAAAGTCCAAATCATGTATGTCTGGATCGATGGAACCGGAGAGGGACTCCGCTGTAAGACCAGAACGCTGGATTCGGAGCCCAAGTGCATTGAAGAACTGCCTGAATGGAACTTTGATGGCTCTAGCACCTACCAGTCTGAGGGCTCAAACAGTGATATGTATTTGATTCCTTCTGCAATGTTCAGAGATCCTTTCCGCAAAGACCCCAACAAACTGGTCCTGTGTGAAGTGCTGAAGTACAACCGCAAACCTGCAGAAACCAACCTTCGTTTGACGTGTAATAAAGTTATGGACATGGTTGAGAACCAGGTCCCTTGGTTTGGCATGGAGCAAGAGTACACCATTTTGGGCACGGATGGACACCCATTTGGCTGGCCCAACAACGGCTTCCCTGGCCCACAAGGTCCCTATTACTGTGGAGTGGGATCTGACAAGGCCTACGGTAGAGATATTGTGGAAGCCCACTACAGAGCCTGCCTGTATGCTGGGGTCATGATCTGTGGAACCAATGCTGAAGTCATGCCTGCACAGTGGGAGTTCCAGGTTGGCCCTTGTGAAGGCATCAGCATGGGTGATCACCTTTGGGCAGCTAGGTTCATTCTCCACCGGGTGTGTGAGGACTTTGGTGTGGTGGCCTCATTTGACCCCAAGCCCATCACTGGAAACTGGAACGGCGCTGGATGCCACACCAATTTCAGCACAAAAGAGATGAGGGAAGAGGGTGGTTTGAAGGCCATTGAGGAGTCCATTGAAAGGCTGGGGAAGAGGCATAGCTACCACATCCGTGCCTATGACCCTAAAGGGGGACTTGACAATGCCCGTCGCCTTACCGGCCACCATGAAACCTCCAACATCCACGAGTTCTCTGCCGGTGTGGCCAACCGCGGTGCCAGCATCCGCATCCCTCGCACTGTGGGCCAGGAGAAGAAGGGCTACTTCGAGGACCGCCGCCCATCTGCCAACTGTGACCCGTACGCCGTGACTGAGGCTATAATCCGCACCTGTTTGCTTAGTGAGGAAGGAGATGAACCTGTGAACTACTAGATCTAACTAGAGCCACACCTCTGGACTGAATCCCCTTCGCCACCACCCTTCTCCATTCTCATTTTCTAAATGGCTGAAAAGTTGAACTAGTACTGTATTTGTTGTAATTTTTCACTGAAATTATTCTAACCTTCTAAATGGCTTAAAGTTGGCTGGTCAACTTAACATGGAATTAAATCTGTTTAacataaaaacaaacatttaatgaAAGATGGTGGCTGACAGGGCATTGTCTTCCCCTTTTGAGTCTTCTAGTGGGGAGTATAACTGTTTTTAAATCCCCATTTGATCTCGCGTTTCCTGCAGTCTGTCGAACTGAAATAAACTAAAGCACATGTGGACACTGACGACTATGGCTGGGCGGCATGTGTAATTGTCTTAATAAAACCTATTTTGCT

Function

NR:

description
glutamine synthetase

GO:

id name namespace
GO:0006542 glutamine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function

KEGG:

id description
K01915 glnA, GLUL; glutamine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588579.2 False 1645 mRNA 0.48 7 18225312 18228347
NM_001124606.1 True 1520 mRNA 0.49 6 18226238 18228390

Neighbor

gene id symbol gene type direction distance location
LOC110508657 LOC106599258 coding upstream 238445 17867728 ~ 17986867 (+)
LOC118944855 NA coding upstream 400590 17813849 ~ 17824722 (+)
LOC110508652 LOC106599248 coding upstream 671325 17497781 ~ 17553987 (+)
LOC110508651 LOC106599247 coding upstream 735822 17480111 ~ 17489490 (+)
LOC110508649 LOC106599662 coding upstream 814649 17397397 ~ 17410663 (+)
LOC110508661 LOC106599266 coding downstream 88226 18316616 ~ 18354743 (+)
LOC110508663 LOC106599269 coding downstream 137699 18366089 ~ 18370884 (+)
LOC100136150 LOC105009935 coding downstream 177793 18406183 ~ 18420007 (+)
LOC110508667 LOC106599281 coding downstream 351073 18579463 ~ 18658560 (+)
LOC110508668 LOC106599284 coding downstream 444912 18673302 ~ 18724171 (+)
G2112426 LOC106599262 non-coding upstream 115588 18108263 ~ 18109724 (+)
G2112396 NA non-coding upstream 142532 18080807 ~ 18082780 (+)
G2112390 NA non-coding upstream 150295 18074719 ~ 18075017 (+)
G2112065 NA non-coding upstream 232531 17987070 ~ 17992781 (+)
G2112066 NA non-coding upstream 408815 17816275 ~ 17816497 (+)
G2112517 NA non-coding downstream 1460 18229850 ~ 18230082 (+)
G2112519 NA non-coding downstream 5437 18233827 ~ 18234406 (+)
G2112763 NA non-coding downstream 167748 18396138 ~ 18396555 (+)
G2112765 NA non-coding downstream 200440 18428830 ~ 18435079 (+)
G2112958 NA non-coding downstream 317180 18545570 ~ 18545816 (+)
G2112127 NA other upstream 321388 17903198 ~ 17903924 (+)
G2111491 NA other upstream 469731 17754937 ~ 17755581 (+)
G2111457 NA other upstream 516683 17708256 ~ 17708629 (+)
G2111300 NA other upstream 809080 17411144 ~ 17416232 (+)
G2111044 NA other upstream 1266460 16953784 ~ 16958852 (+)
G2113059 NA other downstream 438725 18667115 ~ 18668496 (+)
G2113578 NA other downstream 847687 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 1395078 19623468 ~ 19636825 (+)
G2115369 NA other downstream 2213343 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 2612180 20840508 ~ 20842019 (+)

Expression


Co-expression Network