ankrd45 (ankrd45)


Basic Information

Item Value
gene id ankrd45
gene name ankrd45
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22828736 ~ 22830451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021589531.2
GTTTATGGGGATTATACACTTTCCACGTCTTTTTTGTGTGTATATAACTTTGCACTTTCCACACCAATCAAATGACAAAAAGACAATACAGGTAGTCATCGTTTCCTTTCTTTTAAGGATTGGTGTTAGCAGGGAAGGAAAAAGGAGTGACCCTTGTATCCATGGAAACAATACGTGTAATGTATTTATCTAGCAAAAATGACTTTGCCAATGAACCACAGCATACTACGCTATACCAGAACAATGCAGTCAATTGAAGAAAATGCTGTATTTCACTATGCTTTGACTGGAGACATCGAAGGTCTACAAAAACATTTGGAAAACGAGTGCCTTTCTGGCAATGAAGAGCCACCAGAGGATTTGTTCTGGGAAAAGGATGAAATGGGTAGAAATGCACTTTTCATTGCATGTATGCTGGGAAGAAGCACCACCGTGCGGGAACTTTTGAAGCATGGAGCTCATGTTAACGAGTGTACTGCAAGAGGTTATTCCCCACTGCATTGTGCAGCCCTCTGGGGCCAGCTTGAGACAGTGAAAACTTTGGTGGAACTTGGTGCCGACATGCAGGCGAAGAACTTCCGCAGGGAGAGAGCCATGGAAGTTGCCTCccgttattttaaaatggattgtgCAGAATATCTTACTTGGGCAGAGGCCAAGCAGGACTTGCAGTCCTACATAACACATGTGAGAGACACCATTGCTGACCCAGAGAAGGTTCAAGGGAAACTCAACAAGGAGGATAAGATCATATGTACAAACACCTGCTCAGTAAAGTCGGATTGGATCCAGAATGCCAAGAACCCATCTATCCAAGACTTCATTGAGCAGAGGAGACATCTTGAGGACATTATTATCCCCATTCTGTCCAAGCTCACGACTCAACCTGAAGTCACAGCTAAAGCAAGCAAAAACTGAAGATAAACAATGTGTCACAATCAAATATGGGTAAAAAATTGTTAAACTGACCAAAGTGGAATTTGTTGACCATTGCATGTACTATCAAAAtattttaaataataaaatatcAGAACCACCAT

Function

symbol description
ankrd45 Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; liver; nervous system; and pleuroperitoneal region. Orthologous to human ANKRD45 (ankyrin repeat domain 45).

NR:

description
ankyrin repeat domain-containing protein 45

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021589531.2 True 1040 mRNA 0.42 5 22828736 22830451

Neighbor

gene id symbol gene type direction distance location
cenpl cenpl coding upstream 8611 22816873 ~ 22820125 (+)
LOC110508746 brinp2 coding upstream 164753 22547186 ~ 22663983 (+)
LOC118944815 NA coding upstream 439232 22385440 ~ 22389504 (+)
LOC118944814 NA coding upstream 445369 22378109 ~ 22383367 (+)
pappa2 pappa2 coding upstream 547842 22221394 ~ 22280894 (+)
rasal2 NA coding downstream 639 22831090 ~ 22913958 (+)
dhx9 dhx9 coding downstream 84205 22914656 ~ 22934260 (+)
lamc1 LOC106599430 coding downstream 111281 22941732 ~ 23022726 (+)
lamc2 lamc2 coding downstream 194322 23024773 ~ 23042412 (+)
smg7 smg7 coding downstream 226327 23056778 ~ 23087821 (+)
G2118342 NA non-coding upstream 36921 22791307 ~ 22791815 (+)
G2118333 NA non-coding upstream 44842 22783689 ~ 22783894 (+)
G2118330 NA non-coding upstream 46885 22781554 ~ 22781851 (+)
G2118128 NA non-coding upstream 158790 22669621 ~ 22669946 (+)
G2118024 NA non-coding upstream 288810 22539655 ~ 22539926 (+)
G2118532 NA non-coding downstream 247228 23077679 ~ 23201786 (+)
G2118550 NA non-coding downstream 284259 23114710 ~ 23117051 (+)
G2118530 NA non-coding downstream 298194 23128645 ~ 23159265 (+)
G2118573 NA non-coding downstream 329551 23160002 ~ 23162200 (+)
G2118577 NA non-coding downstream 338001 23168452 ~ 23169935 (+)
G2116347 NA other upstream 1453658 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 1986733 20840508 ~ 20842019 (+)
G2115369 NA other upstream 2386567 20441733 ~ 20442169 (+)
LOC110508695 LOC106599333 other upstream 3191983 19623468 ~ 19636825 (+)
G2113578 NA other upstream 3752318 19076077 ~ 19076418 (+)
LOC110508761 LOC106599440 other downstream 271958 23102409 ~ 23103987 (+)
G2118574 NA other downstream 333415 23163866 ~ 23164323 (+)
LOC110508774 LOC106599485 other downstream 1270706 24101070 ~ 24137027 (+)
G2121837 NA other downstream 2889989 25720440 ~ 25721674 (+)

Expression


Co-expression Network