LOC118944814


Basic Information

Item Value
gene id LOC118944814
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22378109 ~ 22383367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040186.1
GAAATTGCTGAGACACTTACAGAGTGGACGAAAGGGGGGGAAGAGTCCCCATGAGAGGATAGAGTGGAATCAAGAGTGTGAAGAAGCGTTTGTCGAGTTAAAGAAGCAATTGTGTCAAGTGCCAGCATTGGGATTGCCAAACATAaaattatctttaaaaaaaatgttgttaatGAACAGGAAAAACATTGTAGCGTGATGGTTACGAAAAAAGGGCCAAGAGGAATGCCACCGTACCTTAGGGCGGTACAGGCGACAGAAACGGTGTTACATAACACGGCTTCCATTACAATGGGTCAAAAAGTAGATTTGTATGTTACACACGCAGTAGCAACCATAGTGGACAGCACGAAAGCACAACATGTTACTAGTGCAAGATGAACAAACTGGGAGTTAACGTTAAATGGGGAAAACTTACAAATTAATAAGGGGAGGGTGAATCGCATACATGTGACCCAGATCAGATTACTCCAAAACCTTTTTTTTTGCAAGAAACAGCATTGGAATCGGGAAAATATTGTATACAGATGGCTAATTACATGAACACAGAAGGGAAGAGTAACGGGCATTTGGAGTAGTTCATGATTTGGGTACATTGTGGTCACAACGGGGCATGTTAACAGTGACAGGAACAGCAATGAAAAAATGGTCTGGAGGTAGAGGCATCAGAAGCATGTCAGTTACCCAGTAAATGAACAGTCGTGAAATGTGAAGCTCATACTAGTCGTACAGATAAAATCGCCATAGGTAATCGTAAAGCAGACGAAATGGCTAAGGCGGCTGCCTTGGTGAGAGAAAGTGTTAGTGAACCACATGTAAATATTGCAGATTCCTTACGATGAGAAATTGGCTAAATTTGCCACAGGAAAACGTGTTTTGGGTTGAAGATTCCATCCTTGAAGGAGGATGGAAATGTTTTGAAGAGgtTATCATGGAAGGTGACGTCAGATCGTGTCTTAATGCATGGAAGGAAAAATTTGACCATAGACAGCGTGTGTAGCCCTCAAAAGACCTCAAAACCCTCCCTAACAGGCTGAAGAAAGTGCGACAAAGGCGTGcaatgagagagacagtgacttTTACCACTCCTATCTGAGTCCGAGCCATAAACCAGGGCCGGGGTGCTGAGAGCGCGTGTGGAGTGAGCGTGGAGAGAGAACAAGCTCAGGGGTGATGTGTGCTAAGTTGATCAACTGGAATTTGAGCCCTAGACTCAAAGTAAGCACTGAGGTCAGTCCTTCTAAATTTGGGTTGGATAATTGATAAAAATGTTTTAGTTGTGATTGGGATACAGCGAGAGAGAATTGCTGAAGCAGAAAATGTAGAAAATGCATTAGGAGTATAGTGTGTCATGGGTTATATGTAATGATAGAGGAGTATCATTCCCAGAGACTGCATATTGTTTCAGGAGGTGGCTCATAGAAGAAGGAGGACAACTAACTGTCCACAATATGGGGATTTAGTTGAACATTACACATACATAGATCATGGTGAGAGTAGAAGAGATAGTGGTGGCATGTCAGACACTATGGTAAACTTTTAGGACACCTGTGACTCAGAGTTTTGTTTGTTTGGATATTATTCCCAACTCATTTTGTTTTTCTCCAATTTCTAACAGCCGGCGAACATTTGACAAATTGCATGCACTAGGTATTCTCACGGCAGgcgctgtagggacagtaactgaaggagctgtagggacagtaactgaaggcaCAGTACTAGTAGCAAAGGATGCTATATTGACAGCATGGAATTGGACTACTGCGCAAATGAGGGGTATTGTGAGACTGTAGTCATGGGCCATGTTGGAAGTAGCAATGTTAACTTTAGTAGCATTGTTGGGATATCAGTTAATGACAACTCATGTCACATGGATTGGTATCTGGTAACTAGGGGACCGATGGGAGGGAAGGGGATGAGGTTACTCAAATATCACAAATGATGTTGTCAGGAAATGACCCATGTGTTGCAGTGTGTATATCCTCAGGTGAAAGCAGAGATATAACCAAGGGCACAGGCTGAATACTGGAGATTGAGTGTACATCAAGAGACACCAGGCGGGGGTGTTGGGACAGCATTGGTTTGGGACACAAAATACTCCATACAGTACCTGCAGCGGTAAATATCGTCATGTCTCTCCTTGGGGGGTGCATAGTTCTCACGTGAAGTGAGGTCCAGCTGCATAATGGGTGAGTGAAAACATCATGACAGAGGAagcggagcgagagagagagagagagactagattccCCTGTAAGACATACAGATGGGTTGGGTCTGGGAGCTACTTTAAACATCATAGTTGGGTTGGGTTAGCTGCTTTATTGGTTAATGCATCATATTATAGAGGATAGAGGGGTAATTGTTCTCTGAACAAAATGTTGAAGGCATTGAGCATTGATGTGAAAGCACATACTGTACTGAGTTACCTCAAGAGGATGTAACGTTGATTAGGGATAAGCACTTGCATATCAGGTGAAATGCAGGAGATGGGGAACAAAGTGAAAATGACATGACTTGGGAACACCTCTCGGAACCTGGGGCCAAAAGGAGAAGACTGGGCGAAAGCATGAGGAAGCTTTGTAGAGCTTTCATTTTTGTGGAAACCCTCAGGAAAGTATCCGGGAGGCATAGGGTCgggtgaagagagagtgggaattgtCAGGGTCTCAGACTTTGGTTTTCatgcatatataattatacatagCTTAtcacattgttaatattgtaatgTTTTATGTATTTTTGTTGCTTTCCAAGTCTTGTGCTATTACTCTCTTAGGAACCAGAAGGGGGAAGTGGAGAAACTAAAAGCTGCTCCATCTGACATAGAACGAGACCGCAGATTCAGCTGGAATTGCATTTTGTTGTGTAATGATAGATGGAAATAAAATTGTGTGATCATAGTACAGAGGCCATAAGTCTCTGAAATTGAAAACCAGTGAATGTTTGTTCATTGTTTGTTCCATTTGTTAGCTTGTTTAATTCATGTTTTATTATCATTGTTTATCCATTTATTAGTCATTTGCAAGTTTATGTAAATTGAACATTAGGACGCTATTGTTCAAGAGGAAGGACTGTTGGAATCggctaaactttgaacattgagatattaaataaatgatagGAAAGGAGCATAGAATCAAAGGAGTGAAAGAGACTGGGTTTTatgtcagaagttaatggttctctGAAGAAAGACAGATGTctttggaatgtgttgggtggacgGGAGAAGCAACGTGCTGAAATAggggagacagatagacatctgtggattaggtgaaggaggggttgaggtcaggaggtgaggtcAGATTCCCTTAAGGGAGTAATAAGGGTTTAATATCTTGTTACTCTCTTCCTGTAgaaccataagatgtaaggataagatgtaaggattggagagaaggaggagtgtcttaaGTGGGATGAATATAACTGTGATGGTGAGAAATCTTTTGCTGTctgaataacagctgtatagatCCTTTGGGCAGAAttaacttggttaaagcttctctagtgtccgtgagttacttactctgaaaaataagaacctaacactagcctctgtgcttctacatctgcattgcttgctctttggaattttaggctgggtttatgcataaacactttgtgacatctgctgatgtaaaaggagctttataaatacatttcattgattgaatttgattgaaaTCACTTTTTCATGTGGCCGAAACTGACAGCTGAAAAAAAATGTGTTATGAATATCTACAGCAATTAATTGCTGTGGCATAATGCATCTGTGCACTCTATCAACCTCCTTGGAAAGGTCAAAAACTCGTTTGAGATTTATGTTGTGATTTTCTATTAATTTAAACAGGTCTGAATTTGACATTTCAGCTGGTGTTTCCAATGGTCTTCAGAAGGCCTAGCTGTGTCCACTCTCAGCAAATGACAAATGGCTTTTCAAAAAAGGACATACATTCTGACCCTTTCTTTTTCACAATTCCATATACCCAGAACCCCagaaataaaacaatacattttgTGGAACATGAACCAACAATGGATGCCCTCCAGGAGCTTATTATACTTTACATTTTCTCCAAGTAAGGTATCTCCAATCAATTAGAGGTCTTACC

Function

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 2-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040186.1 True 4133 mRNA 0.41 3 22378109 22383367

Neighbor

gene id symbol gene type direction distance location
pappa2 pappa2 coding upstream 97215 22221394 ~ 22280894 (+)
tnn tnn coding upstream 448241 21891475 ~ 21930071 (+)
LOC110508733 NA coding upstream 729306 21630620 ~ 21648803 (+)
LOC110508183 LOC106599611 coding upstream 799044 21571910 ~ 21579065 (+)
LOC110508728 LOC106599384 coding upstream 1004812 21368128 ~ 21373297 (+)
LOC118944815 NA coding downstream 2073 22385440 ~ 22389504 (+)
LOC110508746 brinp2 coding downstream 163819 22547186 ~ 22663983 (+)
cenpl cenpl coding downstream 433506 22816873 ~ 22820125 (+)
ankrd45 ankrd45 coding downstream 445369 22828736 ~ 22830451 (+)
rasal2 NA coding downstream 447723 22831090 ~ 22913958 (+)
G2117660 NA non-coding upstream 21489 22356367 ~ 22356620 (+)
G2117603 NA non-coding upstream 114043 22263866 ~ 22264066 (+)
G2117594 LOC106561205 non-coding upstream 134417 22243443 ~ 22243692 (+)
G2117593 NA non-coding upstream 135418 22241975 ~ 22242691 (+)
G2117587 NA non-coding upstream 143327 22234577 ~ 22234782 (+)
G2118024 NA non-coding downstream 156288 22539655 ~ 22539926 (+)
G2118128 NA non-coding downstream 286254 22669621 ~ 22669946 (+)
G2118330 NA non-coding downstream 398187 22781554 ~ 22781851 (+)
G2118333 NA non-coding downstream 400322 22783689 ~ 22783894 (+)
G2118342 NA non-coding downstream 407940 22791307 ~ 22791815 (+)
G2116347 NA other upstream 1003031 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 1536106 20840508 ~ 20842019 (+)
G2115369 NA other upstream 1935940 20441733 ~ 20442169 (+)
LOC110508695 LOC106599333 other upstream 2741356 19623468 ~ 19636825 (+)
G2113578 NA other upstream 3301691 19076077 ~ 19076418 (+)
smg7 smg7 other downstream 697049 23056778 ~ 23087821 (+)
LOC110508761 LOC106599440 other downstream 719042 23102409 ~ 23103987 (+)
G2118574 NA other downstream 780499 23163866 ~ 23164323 (+)
LOC110508774 LOC106599485 other downstream 1717790 24101070 ~ 24137027 (+)
G2121837 NA other downstream 3337073 25720440 ~ 25721674 (+)

Expression


Co-expression Network