G2117603


Basic Information

Item Value
gene id G2117603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22263866 ~ 22264066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2421405
ACTATAGGGTTTTATTCCTGGCTTCTAGGTTCTACAACAGGGTTTTACTCCTGGCATCTAGGTTCTATTACAGGGTTTACCCCTGTCTTCTAGGTTCTACAACAGGGTTTTACTCCTGGCGTCTAGGTTCTACTACAGGGTTTTACTCCTGGCTTCTAGGTTCTACATGGCAACTCCCAAAAGATGTACACTTAGTATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2421405 True 201 lncRNA 0.44 1 22263866 22264066

Neighbor

gene id symbol gene type direction distance location
tnn tnn coding upstream 333998 21891475 ~ 21930071 (+)
LOC110508733 NA coding upstream 615063 21630620 ~ 21648803 (+)
LOC110508183 LOC106599611 coding upstream 684801 21571910 ~ 21579065 (+)
LOC110508728 LOC106599384 coding upstream 890569 21368128 ~ 21373297 (+)
LOC110508726 LOC106599379 coding upstream 915242 21261123 ~ 21348624 (+)
LOC118944814 NA coding downstream 114043 22378109 ~ 22383367 (+)
LOC118944815 NA coding downstream 121374 22385440 ~ 22389504 (+)
LOC110508746 brinp2 coding downstream 283120 22547186 ~ 22663983 (+)
cenpl cenpl coding downstream 552807 22816873 ~ 22820125 (+)
ankrd45 ankrd45 coding downstream 564670 22828736 ~ 22830451 (+)
G2117594 LOC106561205 non-coding upstream 20174 22243443 ~ 22243692 (+)
G2117593 NA non-coding upstream 21175 22241975 ~ 22242691 (+)
G2117587 NA non-coding upstream 29084 22234577 ~ 22234782 (+)
G2117560 rfwd2 non-coding upstream 54184 22208803 ~ 22209682 (+)
G2117548 NA non-coding upstream 67657 22195970 ~ 22196209 (+)
G2117660 NA non-coding downstream 92301 22356367 ~ 22356620 (+)
G2118024 NA non-coding downstream 275589 22539655 ~ 22539926 (+)
G2118128 NA non-coding downstream 405555 22669621 ~ 22669946 (+)
G2118330 NA non-coding downstream 517488 22781554 ~ 22781851 (+)
G2118333 NA non-coding downstream 519623 22783689 ~ 22783894 (+)
G2116347 NA other upstream 888788 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 1421863 20840508 ~ 20842019 (+)
G2115369 NA other upstream 1821697 20441733 ~ 20442169 (+)
LOC110508695 LOC106599333 other upstream 2627113 19623468 ~ 19636825 (+)
G2113578 NA other upstream 3187448 19076077 ~ 19076418 (+)
smg7 smg7 other downstream 816350 23056778 ~ 23087821 (+)
LOC110508761 LOC106599440 other downstream 838343 23102409 ~ 23103987 (+)
G2118574 NA other downstream 899800 23163866 ~ 23164323 (+)
LOC110508774 LOC106599485 other downstream 1837091 24101070 ~ 24137027 (+)
G2121837 NA other downstream 3456374 25720440 ~ 25721674 (+)

Expression


Co-expression Network