LOC110508806 (LOC106570393)


Basic Information

Item Value
gene id LOC110508806
gene name LOC106570393
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 26845034 ~ 26845490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110508806
ATCTTTCCAGCTGTAGATAGTTTACTTAACTTCATAACGCAACATATTTGGTCGCCAGGCATAATGTCCAATTACAGAGGTTCTGAATCTAAGTGGGAACAATTTTGAAGGTATCTCGAAAAAGCGGGTGTTTTTGACACTCTCACCAATGTGTTGGTGGCCCTATACGAAGAGACAGAGAAACCTAATAATTCTTTGAACTTTCCAAAGCATCACCTTGGTGTTGCTGGTGTGGAGACAGCAGATGCCGAGGCCCTTCGTTTGGGGCTGTCTGAGCTACAGCAGAAGTGTGATCTGCTCATGGAGGAAACCAAATAACTCAGAAAGAGGCTTCTGCAGTATGAACCAACACCTGAGGATGGAGCAGCGGAGTAATGTAGTTGGTTGAATTGTTATATTTTTTTCACTGTTTGGAAGGGGCGCTTAATGTAAAGCCATAATTtctttatagtgtgtg

Function

NR:

description
PREDICTED: C-Myc-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110508806 True 457 mRNA 0.43 1 26845034 26845490

Neighbor

gene id symbol gene type direction distance location
LOC110508800 LOC106599548 coding upstream 135466 26707377 ~ 26709568 (+)
LOC110508797 LOC106599544 coding upstream 158226 26679791 ~ 26688506 (+)
LOC110508796 LOC106599541 coding upstream 169353 26656615 ~ 26675681 (+)
LOC110508795 LOC106599535 coding upstream 188924 26628352 ~ 26656110 (+)
trnaw-cca-61 NA coding upstream 219721 26625242 ~ 26625313 (+)
xrn1 LOC106599575 coding downstream 223555 27069045 ~ 27136729 (+)
LOC110508820 rab2a coding downstream 485309 27330799 ~ 27345830 (+)
LOC110508821 chd7 coding downstream 502614 27348104 ~ 27454444 (+)
LOC110508826 LOC106599160 coding downstream 786986 27632476 ~ 27674752 (+)
LOC110508827 LOC106599210 coding downstream 875059 27720549 ~ 27725061 (+)
G2123026 NA non-coding upstream 32219 26774977 ~ 26812815 (+)
G2122910 NA non-coding upstream 95873 26721205 ~ 26749161 (+)
G2122921 LOC106599551 non-coding upstream 108459 26735992 ~ 26736575 (+)
G2122903 NA non-coding upstream 131643 26712825 ~ 26713391 (+)
G2122902 NA non-coding upstream 132325 26712433 ~ 26712709 (+)
LOC110508195 LOC106599554 non-coding downstream 33854 26782925 ~ 26909897 (+)
G2123096 NA non-coding downstream 72628 26918118 ~ 26918536 (+)
G2123099 LOC100194703 non-coding downstream 77371 26922861 ~ 26923286 (+)
G2123110 NA non-coding downstream 103598 26949088 ~ 26949338 (+)
G2123109 NA non-coding downstream 104177 26949667 ~ 26950517 (+)
G2122177 NA other upstream 470474 26357538 ~ 26374560 (+)
G2121837 NA other upstream 1123360 25720440 ~ 25721674 (+)
LOC110508774 LOC106599485 other upstream 2734324 24101070 ~ 24137027 (+)
G2118574 NA other upstream 3680711 23163866 ~ 23164323 (+)
G2123101 NA other downstream 96710 26942200 ~ 26945187 (+)
G2123174 NA other downstream 255822 27101312 ~ 27104270 (+)
G2123170 NA other downstream 260544 27106034 ~ 27109282 (+)
LOC110508851 LOC106599130 other downstream 1676737 28522217 ~ 28551515 (+)

Expression


Co-expression Network