G2102045


Basic Information

Item Value
gene id G2102045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 8935323 ~ 8935822 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2404329
TAGAAATATAACTTTAACACAGACAAGCATGTTATTTACATGaacactaccattcaaaggtttgggggtcacttagaaatgtcttttgtttttgaaagaaaagcacatttttttgtcctttaaaataacatcaaattgatcagaaatgcagtgtagacattgttaatgttgtaaatgtctgttgtagctggaaatgggcctctgtacaacagttttcatctgtgctaacataattgcaaaagggttttctaatgatcaattagccttttaaaatgataaacttggattagctaacacagcgtgccattggaacacaggagtgatggttgctgataatgggcctctgtatcaGCAACcaacactcctgtgttccaatggcatgttgtgttagctaatccaagtttatcattttaaaaggctaattgatcattagaaaacccttttgcaattatgttagcacagatgaaaactgttgttctgattaaagaagcaataaaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2404329 True 500 lncRNA 0.34 1 8935323 8935822

Neighbor

gene id symbol gene type direction distance location
epha4b LOC106600124 coding downstream 24822 8781818 ~ 8910501 (-)
dnah9l LOC102781332 coding downstream 337056 8522163 ~ 8598267 (-)
LOC118936616 LOC106600091 coding downstream 413170 8480324 ~ 8522153 (-)
LOC110509208 LOC106600076 coding downstream 512337 8408883 ~ 8422986 (-)
LOC110508449 NA coding downstream 551733 8357821 ~ 8383590 (-)
LOC110508274 LOC106600446 coding upstream 40877 8976699 ~ 8978156 (-)
LOC110508456 LOC106600142 coding upstream 58100 8993922 ~ 8995746 (-)
LOC110508458 LOC105022262 coding upstream 171352 9107174 ~ 9123547 (-)
LOC110508459 LOC106599937 coding upstream 218895 9154717 ~ 9180242 (-)
LOC110508462 lect1 coding upstream 320124 9255946 ~ 9263669 (-)
G2102039 NA non-coding downstream 12089 8923003 ~ 8923234 (-)
G2101973 NA non-coding downstream 154034 8781024 ~ 8781289 (-)
G2101970 NA non-coding downstream 159973 8775135 ~ 8775350 (-)
G2101966 NA non-coding downstream 163100 8772006 ~ 8772223 (-)
G2101932 NA non-coding downstream 170274 8699909 ~ 8765049 (-)
G2102047 NA non-coding upstream 472 8936294 ~ 8936527 (-)
G2102043 NA non-coding upstream 29388 8965210 ~ 8970410 (-)
G2102077 NA non-coding upstream 45170 8980992 ~ 8981222 (-)
G2102083 LOC106600129 non-coding upstream 57107 8992929 ~ 8993845 (-)
G2102087 NA non-coding upstream 65421 9001243 ~ 9001520 (-)
G2101464 NA other downstream 695470 8238144 ~ 8239853 (-)
G2101243 NA other downstream 776805 8158219 ~ 8158518 (-)
LOC110508443 LOC106600051 other downstream 936458 7993411 ~ 8044009 (-)
LOC110508434 LOC106600027 other downstream 1164140 7767544 ~ 7837267 (-)
G2102731 sugt1 other upstream 295872 9231694 ~ 9255166 (-)
G2102910 nop9 other upstream 632144 9567966 ~ 9569051 (-)
G2103015 NA other upstream 840797 9776619 ~ 9776908 (-)

Expression


Co-expression Network